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Information on SUBCLASS 5.55.1
Subclass Accession number: 3292
Subclass: 5.55.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 30.8 +/- 29.4
Average RMSD (Å) : 0.775 +/- 0.419

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhpXXXGXh
(φψ)-conformation: bbpaebeaa
Pattern: xx[HV]xxx[GR]x[G]x[MP]x[ACKT][AST][IV][AVY][PV][ETY][ET]x
Conservation:-0.371-0.946-0.172-0.530-0.621-0.6530.503-0.5833.264-1.2610.810-0.201-0.6210.3111.467-0.2670.071-0.5270.530-0.201
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j79_A_141j79   A1433DWHLHLRDGDMLKTVVPYTSEEEE---SHHHHHHHHHHHHbabbbaebeaaaaaaaaaaa
1odk_A_561odk   A5877VSVQTTGMGTPSAAIVVEELEEEE---SSHHHHHHHHHHHbbbbxaebeaaaaaaaaaaa
1rxy_A_601rxy   A6281VIVCSTGIGGPSTSIAVEELEEEE---SSHHHHHHHHHHHbbbbxaexeaaaaaaaaaaa
1vhw_A_561vhw   A5877ISVMGHGMGIPSCSIYVTELEEEE---SSHHHHHHHHHHHbbbbxaebeaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j79_A_141j79   A     KCXLYSINE NZ-CARBOXYLIC ACID H - 16
1j79_A_141j79   A     ZNZINC ION H - 16
1j79_A_141j79   A     OROOROTIC ACID H - 16
1j79_A_141j79   A     ZNZINC ION L - 17
1j79_A_141j79   A     KCXLYSINE NZ-CARBOXYLIC ACID H - 18
1j79_A_141j79   A     ZNZINC ION H - 18
1j79_A_141j79   A     OROOROTIC ACID H - 18
1j79_A_141j79   A     OROOROTIC ACID R - 20
1rxy_A_601rxy   A     ACTACETATE ION E - 80
1vhw_A_561vhw   A     ADNADENOSINE H - 63
1vhw_A_561vhw   A     ADNADENOSINE G - 64
1vhw_A_561vhw   A     ADNADENOSINE M - 65
1vhw_A_561vhw   A     ADNADENOSINE G - 66
1vhw_A_561vhw   A     ADNADENOSINE I - 72

Clusters included in this Subclass
CLUSTER: EH.4.247