ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.40.1

Subclass Accession number: 334
Subclass: 4.40.1

Type: HE alpha-beta
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.4 (>75 %)  1.4.1 (>75 %)  1.4.1.3
GO : GO:0016810 (>50 %)
SCOP : 51734 (>75 %)  51735 (>75 %)  51883 (>75 %)

Number of loops: 3

Average sequence ID (%) : 4.8 +/- 9.6
Average RMSD (Å) : 1.133 +/- 0.321

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	XXXphpXh
(φψ)-conformation:	aapbbabb

Pattern:	x	[IP]	x	x	x	x	x	[DET]	[PVY]	[EHT]	[HV]	[LVY]	[ILV]	x
Conservation:	-0.181	0.145	-0.928	-0.741	-0.928	-0.181	-1.114	1.126	-0.741	0.379	0.345	0.566	2.620	-0.368

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c3p_A_228	1c3p	A	240	253	EIVKEVFEPEVYLL	HHHHHH---SEEEE	aaaaaabbxabbbb
1f2d_A_59	1f2d	A	59	72	VPDIVEGDYTHLVS	HHHHHHS--SEEEE	aaaaaaxbbabbbb
1vec_A_194	1vec	A	197	210	DIMRLDDTVHVVIA	HHHHTTS--SEEEE	aaaaaaxxbabbbb

Clusters included in this Subclass

CLUSTER: HE.5.166