Logo
Information on SUBCLASS 10.3.1
Subclass Accession number: 3552
Subclass: 10.3.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 27.0 +/- 19.8
Average RMSD (Å) : 0.600 +/- 0.141

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpPpNPXGXXhpRX
(φψ)-conformation: bbwpbwalppppaa
Pattern: [ACGL][LV][FIL][FLV][CT][NST][P][HNS][N][P][CLTV][G]xx[FMPW][EKST][KR][DKNP]x[LV][EQY]x[IL][AKLV][DRS]x[ACV][EKL][DEKS]
Conservation:-0.9200.301-0.044-0.2960.4110.0712.392-0.0771.8972.392-0.5791.897-0.889-0.858-0.796-0.4870.792-0.579-0.6920.293-0.142-1.1670.503-0.858-0.444-0.858-0.309-0.621-0.332
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bw0_A_1781bw0   A180208LLIVTNPSNPCGSNFSRKHVEDIVRLAEEEEEEESS-TTT-----HHHHHHHHHHHHHbbbbbbwbbwavxbpxaaaaaaaaaaaaa
1c7n_A_1651c7n   A167195ALLFCSPHNPVGRVWKKDELQKIKDIVLKEEEEESSBTTTTB---HHHHHHHHHHHHHbbxbbbwxxwavxbpxaaaaaaaaaaaaa
1lc5_A_1491lc5   A149177CLFLCTPNNPTGLLPERPLLQAIADRCKSEEEEESS-TTT-----HHHHHHHHHHHHHbbbbbbwxbwavxxxpaaaaaaaaaaaaa
1m7y_A_1921m7y   A194222GVLVTNPSNPLGTTMTRNELYLLLSFVEDEEEEESS-TTT-----HHHHHHHHHHHHHebbbbbwxbwavbxxxaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bw0_A_1781bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) T - 184
1bw0_A_1781bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) P - 186
1bw0_A_1781bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 187
1bw0_A_1781bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) N - 188
1c7n_A_1651c7n   A     PLPPYRIDOXAL-5'-PHOSPHATE C - 171
1c7n_A_1651c7n   A     PLPPYRIDOXAL-5'-PHOSPHATE P - 173
1c7n_A_1651c7n   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 175
1lc5_A_1491lc5   A     PIHYDROGENPHOSPHATE ION N - 157
1m7y_A_1921m7y   A     PPG4-(2-AMINO-ETHOXY)-2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUT-3-ENOIC ACID T - 198
1m7y_A_1921m7y   A     PPG4-(2-AMINO-ETHOXY)-2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUT-3-ENOIC ACID P - 200
1m7y_A_1921m7y   A     PPG4-(2-AMINO-ETHOXY)-2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUT-3-ENOIC ACID N - 202

Clusters included in this Subclass
CLUSTER: EH.10.71
CLUSTER: EH.11.34