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Information on SUBCLASS 11.13.1
Subclass Accession number: 3576
Subclass: 11.13.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>75 %)  3.1.3 (>75 %)  3.1.3.48
GO : GO:0005507 (>75 %)  GO:0008471 (>75 %)  GO:0016679 (>75 %)  GO:0016682 (>75 %)  GO:0016788 (>50 %)  GO:0016791 (>50 %)  GO:0042578 (>50 %)  GO:0046914 (>75 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  52787 (>75 %)  52788 (>75 %)  52789 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 65.0 +/- -12.5
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 19 delta (°): 45-90 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: XINcXXhpXPpVPXL
(φψ)-conformation: bbllbbpbppabpaa
Pattern: [F][FT][I][N][GN][AT][AS][FY][ET][PS][P][ST][V][P][TV][L][L][Q][I][ILM]
Conservation:1.296-1.2610.0831.296-0.458-0.989-0.8240.525-1.125-0.9291.902-0.6570.0831.902-0.9890.0830.0830.6890.083-0.793
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gyc_A_3371gyc   A337356FFINNASFTPPTVPVLLQILEEETTB-----SS-HHHHHHxbblvbbxbpxabpaaaaaa
1hfu_A_3391hfu   A340359FTINGTAYESPSVPTLLQIMEEETTB-----SS-HHHHHHxbblvbxxbxxabxaaaaaa
1kya_A_3371kya   A337356FFINGASFTPPTVPVLLQIIEEETTB-----SS-HHHHHHxbblvbbpbpxabwaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gyc_A_3371gyc   A     CUCOPPER (II) ION F - 337
1gyc_A_3371gyc   A     IPAISOPROPYL ALCOHOL F - 337
1gyc_A_3371gyc   A     NAGN-ACETYL-D-GLUCOSAMINE F - 338
1gyc_A_3371gyc   A     NAGN-ACETYL-D-GLUCOSAMINE N - 340
1gyc_A_3371gyc   A     NAGN-ACETYL-D-GLUCOSAMINE N - 341
1gyc_A_3371gyc   A     NAGN-ACETYL-D-GLUCOSAMINE S - 343
1gyc_A_3371gyc   A     IPAISOPROPYL ALCOHOL S - 343
1gyc_A_3371gyc   A     IPAISOPROPYL ALCOHOL F - 344
1gyc_A_3371gyc   A     IPAISOPROPYL ALCOHOL T - 345
1hfu_A_3391hfu   A     CUCOPPER (II) ION F - 340
1hfu_A_3391hfu   A     NAGN-ACETYL-D-GLUCOSAMINE N - 343
1kya_A_3371kya   A     XYD2,5-DIMETHYLANILINE F - 337
1kya_A_3371kya   A     NAGN-ACETYL-D-GLUCOSAMINE T - 345
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gyc_A_3371gyc   A NA5NAG BINDING SITE FOR CHAIN AF - 338
1gyc_A_3371gyc   A NA8NAG BINDING SITE FOR CHAIN AN - 340
1gyc_A_3371gyc   A NA8NAG BINDING SITE FOR CHAIN AN - 341

Clusters included in this Subclass
CLUSTER: EH.10.64