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Information on SUBCLASS 1.2.5
Subclass Accession number: 3657
Subclass: 1.2.5 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 24

Average sequence ID (%) : 7.5 +/- 15.8
Average RMSD (Å) : 0.571 +/- 0.146

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: XXXXX
(φψ)-conformation: bbabb
Pattern: xxxxx
Conservation:-1.7260.0660.6940.3000.666
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b12_A_991b12   A104108EKFAYEESEExpaxb
1bt4_A_1431bt4   A148152LTSNEEESEEbbabx
1iug_A_1241iug   A127131LVHSEEESEEbbabx
1izd_A_1921izd   A194198TADGYEESEEbxabb
1j71_A_2871j71   A288292YFGISEESEEbxabb
1je5_A_1031je5   A110114CYASFEESEEbxabb
1jhj_A_1521jhj   A152156HMRQIEE-EEbbabb
1lk5_A_2031lk5   A205209ENGIFEESEEbbaxb
1mdb_A_1251mdb   A128132IPDAYEESEEbxabb
1mpp_*_2811mpp   -283287MFIVLEESEEbxaxx
1o59_A_1741o59   A174178GIARFEESEEbbabb
1o59_A_3341o59   A334338GVKRIEE-EEbbabb
1oih_A_1931oih   A196200HPVVREESEEbxabb
1pbt_A_621pbt   A6569FLSDEEESEEbxabb
1pso_E_1901pso   E193197TVDSIEE-EExbabb
1ryo_A_911ryo   A9195PQTFYEESEEwbabb
1s1p_A_151s1p   A1620MPVLGEESEEbxabb
1sat_*_1151sat   -119123NYSQDEE-EEbbaba
1ut9_A_4641ut9   A464468VHHKIEE-EEbpabb
1vjo_A_1501vjo   A153157LVHAEEESEEbxabx
2apr_*_1962apr   -198202TVDRAEE-EEbxabb
2asi_*_3152asi   -317321MFIILEESEEbxaxb
3psg_*_1903psg   -193197TLDSIEE-EExbabb
7req_A_2357req   A235239WNSISEE-EExxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bt4_A_1431bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 149
1bt4_A_1431bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 151
1bt4_A_1431bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 152
1iug_A_1241iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) V - 128
1iug_A_1241iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 130
1iug_A_1241iug   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) E - 131
1j71_A_2871j71   A     EOHETHANOL R - 293
1o59_A_1741o59   A     MSESELENOMETHIONINE G - 174
1o59_A_1741o59   A     MSESELENOMETHIONINE I - 175
1o59_A_1741o59   A     MSESELENOMETHIONINE L - 180
1o59_A_3341o59   A     MSESELENOMETHIONINE K - 336
1pbt_A_621pbt   A     MSESELENOMETHIONINE I - 62
1pbt_A_621pbt   A     MSESELENOMETHIONINE F - 64
1ryo_A_911ryo   A     OXLOXALATE ION Y - 95
1ryo_A_911ryo   A     FEFE (III) ION Y - 95
1s1p_A_151s1p   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE F - 21
1s1p_A_151s1p   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 22
1vjo_A_1501vjo   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 154
1vjo_A_1501vjo   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 156
1vjo_A_1501vjo   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 157
7req_A_2357req   A     2CP2-CARBOXYPROPYL-COENZYME A N - 236
7req_A_2357req   A     2CP2-CARBOXYPROPYL-COENZYME A I - 238
7req_A_2357req   A     2CP2-CARBOXYPROPYL-COENZYME A S - 239

Clusters included in this Subclass
CLUSTER: AR.0.5