Information on SUBCLASS 5.12.2 |
Subclass Accession number: 372
Subclass: 5.12.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) 2 (>75 %) 3 (>50 %) SCOP : 52140 (>50 %) 52141 (>50 %) 52142 (>50 %) |
Number of loops: 4 Average sequence ID (%) : 7.7 +/- 10.0 Average RMSD (Å) : 1.350 +/- 0.191 Consensus geometry
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Consensus Sequence: | XpXhXcXXX |
(φψ)-conformation: | aappplpbb |
Pattern: | x | x | x | [DKST] | [GRST] | x | x | [DG] | [AKS] | x | x | x | x |
Conservation: | 0.448 | -1.214 | -0.468 | 0.278 | -0.129 | -0.672 | -0.672 | 2.769 | 0.863 | -0.332 | -0.739 | 0.064 | -0.197 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1azs_B_1022 | 1azs | B | 1030 | 1042 | MDSTGVLDKIQVT | HHHT--TTEEEEE | aaaaxbxlbbbbx |
1cbf_*_59 | 1cbf | - | 61 | 73 | LIAKSKPGAEVLK | HHTTS-TT-EEEE | aaaaxxpvpxbbx |
1isp_A_138 | 1isp | A | 138 | 150 | NYLSRLDGARNVQ | HHHH--BTSEEEE | aaaaxbxgxxxbx |
1mgp_A_234 | 1mgp | A | 245 | 257 | LREDTPEGSKLRV | HHTTS-TT-EEEE | aaaabpxvxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mgp_A_234 | 1mgp | A | PLMPALMITIC ACID | I - 258 |
1mgp_A_234 | 1mgp | A | MSESELENOMETHIONINE | V - 260 |
1mgp_A_234 | 1mgp | A | PLMPALMITIC ACID | V - 260 |
1mgp_A_234 | 1mgp | A | MSESELENOMETHIONINE | H - 261 |
Clusters included in this Subclass |
CLUSTER: HE.6.80 |