Information on SUBCLASS 5.80.1 |
Subclass Accession number: 4084
Subclass: 5.80.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 8.3 +/- 0.0 Average RMSD (Å) : 1.100 +/- 0.000 Consensus geometry
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Consensus Sequence: | phIXpXXXX |
(φψ)-conformation: | _bppaapb_ |
Pattern: | [RT] | [AI] | [I] | [EP] | [KS] | x | x | [HI] | [GT] | [VW] | [AW] | [SV] |
Conservation: | 0.095 | -0.476 | 2.382 | 0.667 | 0.381 | -1.620 | -0.476 | -0.476 | -0.191 | 0.381 | 0.381 | -1.048 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpm_A_146 | 1gpm | A | 148 | 159 | TAIPSDFITVAS | EE--TT-EEEEE | abxwaabbxabb |
1vk6_A_3 | 1vk6 | A | 3 | 14 | RIIEKLDHGWWV | EE--TT-EEEEE | bxxbaapbebbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1vk6_A_3 | 1vk6 | A | MSESELENOMETHIONINE | R - 3 |
1vk6_A_3 | 1vk6 | A | MPD2-METHYL-2,4-PENTANEDIOL | R - 3 |
1vk6_A_3 | 1vk6 | A | MSESELENOMETHIONINE | V - 15 |
1vk6_A_3 | 1vk6 | A | MSESELENOMETHIONINE | S - 16 |
1vk6_A_3 | 1vk6 | A | MSESELENOMETHIONINE | H - 17 |
Clusters included in this Subclass |
CLUSTER: AR.6.228 |