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Information on SUBCLASS 1.2.11
Subclass Accession number: 4429
Subclass: 1.2.11 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 16.1 +/- 21.0
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XppXX
(φψ)-conformation: aabaa
Pattern: [lty]x[akr][CDEKQRST][DHNSY][dekpq][aefl][FILT][AKRS][EFHQRY]
Conservation:-0.054-1.5610.359-0.6080.9230.177-1.6421.0121.1910.203
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8r_A_2021a8r   A202211LFKSSQNTRHHHHH-HHHHHaaaaxaaaaa
1dxj_A_1411dxj   A141150LVARDAVISFHHHH-HHHHHaaaabaaaaa
1fi4_A_2141fi4   A215224TVATSELFKEHHHH-SHHHHaaaaxaaaaa
1hyo_A_951hyo   A95104RLRDDKELRQHHHH-HHHHHaaaaxaaaaa
1kcl_A_3971kcl   A397406LRKCNPAIAYHHHH-HHHHHaaaabaaaaa
1o4v_A_1181o4v   A129138LGIKYPEIARHHTT-HHHHHaaaabaaaaa
1pam_A_3971pam   A397406LRKSNPAIAYHHHH-HHHHHaaaabaaaaa
2hgs_A_932hgs   A93102TIKQDDFTARHHHH-HHHHHaaaabaaaaa
5rub_A_4235rub   A426435YAREHKELARHHHT-HHHHHaaaabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fi4_A_2141fi4   A     MSESELENOMETHIONINE L - 214
1fi4_A_2141fi4   A     MSESELENOMETHIONINE T - 215
1fi4_A_2141fi4   A     MSESELENOMETHIONINE V - 216
1fi4_A_2141fi4   A     MSESELENOMETHIONINE A - 217
1fi4_A_2141fi4   A     MSESELENOMETHIONINE F - 222
1fi4_A_2141fi4   A     MSESELENOMETHIONINE I - 226

Clusters included in this Subclass
CLUSTER: HH.1.67
CLUSTER: HH.2.135