Information on SUBCLASS 1.2.11 |
Subclass Accession number: 4429
Subclass: 1.2.11 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 16.1 +/- 21.0 Average RMSD (Å) : 0.400 +/- 0.173 Consensus geometry
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Consensus Sequence: | XppXX |
(φψ)-conformation: | aabaa |
Pattern: | [lty] | x | [akr] | [CDEKQRST] | [DHNSY] | [dekpq] | [aefl] | [FILT] | [AKRS] | [EFHQRY] |
Conservation: | -0.054 | -1.561 | 0.359 | -0.608 | 0.923 | 0.177 | -1.642 | 1.012 | 1.191 | 0.203 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8r_A_202 | 1a8r | A | 202 | 211 | LFKSSQNTRH | HHHH-HHHHH | aaaaxaaaaa |
1dxj_A_141 | 1dxj | A | 141 | 150 | LVARDAVISF | HHHH-HHHHH | aaaabaaaaa |
1fi4_A_214 | 1fi4 | A | 215 | 224 | TVATSELFKE | HHHH-SHHHH | aaaaxaaaaa |
1hyo_A_95 | 1hyo | A | 95 | 104 | RLRDDKELRQ | HHHH-HHHHH | aaaaxaaaaa |
1kcl_A_397 | 1kcl | A | 397 | 406 | LRKCNPAIAY | HHHH-HHHHH | aaaabaaaaa |
1o4v_A_118 | 1o4v | A | 129 | 138 | LGIKYPEIAR | HHTT-HHHHH | aaaabaaaaa |
1pam_A_397 | 1pam | A | 397 | 406 | LRKSNPAIAY | HHHH-HHHHH | aaaabaaaaa |
2hgs_A_93 | 2hgs | A | 93 | 102 | TIKQDDFTAR | HHHH-HHHHH | aaaabaaaaa |
5rub_A_423 | 5rub | A | 426 | 435 | YAREHKELAR | HHHT-HHHHH | aaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | L - 214 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | T - 215 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | V - 216 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | A - 217 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | F - 222 |
1fi4_A_214 | 1fi4 | A | MSESELENOMETHIONINE | I - 226 |
Clusters included in this Subclass |
CLUSTER: HH.1.67 |
CLUSTER: HH.2.135 |