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Information on SUBCLASS 3.35.1
Subclass Accession number: 4769
Subclass: 3.35.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 17.6 +/- 0.0
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhhXGhX
(φψ)-conformation: aappeaa
Pattern: [AP][GL][AQ][MV][AV][KP][G][GI][EL][GR][LY][AI][L][FK][GR][M][GV]
Conservation:0.029-1.118-0.2990.356-0.1350.1932.486-1.118-0.954-0.2990.029-0.4621.175-0.626-0.2991.831-0.790
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h2s_A_951h2s   A114130AGAMVPGIERYALFGMGHHHH--STHHHHHHHHHaaaabxeaaaaaaaaaa
1uoh_A_2081uoh   A208224PLQVAKGGLGLILKRMVHHHH--TTHHHHHHHHHaaaaxxeaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h2s_A_951h2s   A     RETRETINAL V - 108
1h2s_A_951h2s   A     RETRETINAL M - 109
1h2s_A_951h2s   A     RETRETINAL A - 111
1h2s_A_951h2s   A     RETRETINAL G - 112
1h2s_A_951h2s   A     RETRETINAL F - 113
1h2s_A_951h2s   A     RETRETINAL L - 126
1h2s_A_951h2s   A     RETRETINAL F - 127
1h2s_A_951h2s   A     RETRETINAL G - 130
1h2s_A_951h2s   A     RETRETINAL A - 131
1h2s_A_951h2s   A     RETRETINAL F - 134

Clusters included in this Subclass
CLUSTER: HH.4.265