Logo
Information on SUBCLASS 2.2.18
Subclass Accession number: 488
Subclass: 2.2.18 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 16.9 +/- 15.4
Average RMSD (Å) : 0.371 +/- 0.138

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hXpXGX
(φψ)-conformation: bbaaeb
Pattern: [giltv][almtv][cdgs][ADKNS]x[G][gitv]xx
Conservation:-0.518-0.128-0.2660.063-0.5012.616-0.333-0.470-0.463
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1axi_B_1061axi   B111119LTSNGGTVDEEETTEEEExbbaaexab
1dki_A_1841dki   A188196GVGKVGGHAEEETTEEEEbbbaaexbx
1fc6_A_3351fc6   A339347IADSQGIRDEEETTEEEEbbbaaexab
1k1e_A_251k1e   A2533HYDANGEAIEEETTEEEExxbaaexab
1ktj_A_1041ktj   A110118VMGDDGVLAEEETTEEEEbbbaaexab
1lxj_A_391lxj   A4149TLHSAGTTIEEETTEEEEbxbaaebxb
2hrv_A_1092hrv   A110118LLCKHGVIGEEETTEEEEbbbaaexab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k1e_A_251k1e   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID H - 25
1k1e_A_251k1e   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID I - 33
1lxj_A_391lxj   A     MSESELENOMETHIONINE G - 46
1lxj_A_391lxj   A     MSESELENOMETHIONINE P - 52
2hrv_A_1092hrv   A     ZNZINC ION C - 112
2hrv_A_1092hrv   A     ZNZINC ION K - 113
2hrv_A_1092hrv   A     ZNZINC ION H - 114
2hrv_A_1092hrv   A     ZNZINC ION G - 115
2hrv_A_1092hrv   A     ZNZINC ION I - 117

Clusters included in this Subclass
CLUSTER: HA.1.44
CLUSTER: HA.1.90
CLUSTER: HA.2.90