Information on SUBCLASS 5.30.1 |
Subclass Accession number: 4922
Subclass: 5.30.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 14.2 +/- 16.5 Average RMSD (Å) : 0.600 +/- 0.082 Consensus geometry
|
Consensus Sequence: | XhchXXcpX |
(φψ)-conformation: | aalbppgaa |
Pattern: | [ACD] | x | [GKQ] | [FLV] | [ADS] | x | x | x | [DGN] | [IKL] | [EP] | x | [GK] | [EKY] | [AGKT] | x | [AKRS] | [EQY] | [FIMV] | [ADGR] |
Conservation: | -0.236 | -1.082 | 0.094 | 0.364 | 0.102 | -1.218 | -0.447 | -1.353 | 1.128 | -0.086 | 2.679 | 0.015 | 1.599 | 0.192 | -0.810 | -0.878 | -0.130 | 0.598 | 0.482 | -1.014 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f1z_A_210 | 1f1z | A | 214 | 233 | CKQVDIAYDLELGKTLSEIR | HHHHHHHHT--TTHHHHHHH | aaaaaaaalbxpgaaaaaaa |
1geg_A_188 | 1geg | A | 194 | 213 | DRQVSEAAGKPLGYGTAEFA | HHHHHHHHT--TTHHHHHHH | aaaaaaaavbppgaaaaaaa |
1k2w_A_190 | 1k2w | A | 194 | 213 | DAKFADYENLPRGEKKRQVG | HHHHHHHHT--TTHHHHHHH | aaaaaaaalbxpgaaaaaaa |
1kfs_A_770 | 1kfs | A | 770 | 789 | AFGLARQLNIPRKEAQKYMD | HHHHHHHHT--TTTHHHHHH | aaaaaaaavbxpvaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1geg_A_188 | 1geg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | P - 188 |
1geg_A_188 | 1geg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | M - 189 |
1geg_A_188 | 1geg | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | W - 190 |
Clusters included in this Subclass |
CLUSTER: HH.5.166 |