Logo
Information on SUBCLASS 2.2.29
Subclass Accession number: 499
Subclass: 2.2.29 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  6.3 (>50 %)  6.3.2 (>50 %)  6.3.2.19
GO : GO:0004553 (>75 %)  GO:0004840 (>50 %)  GO:0004842 (>50 %)  GO:0008639 (>50 %)  GO:0016798 (>75 %)  GO:0016874 (>50 %)  GO:0016879 (>50 %)  GO:0016881 (>50 %)  GO:0030151 (>75 %)  GO:0046914 (>75 %)  
SCOP : 50684 (>75 %)  50692 (>75 %)  50696 (>75 %)  51350 (>75 %)  51445 (>75 %)  54494 (>50 %)  54495 (>50 %)  54496 (>50 %)  
 Number of loops: 4

Average sequence ID (%) : 1.9 +/- 4.9
Average RMSD (Å) : 0.550 +/- 0.238

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpXppX
(φψ)-conformation: bpaaba
Pattern: xxxxxxx[DHRT]x
Conservation:-0.681-0.529-0.3761.303-0.2231.3300.2340.692-1.750
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dx5_I_3761dx5   I378386PIPHEPHRCEETTEEEEEpxaabaabb
1e4m_M_4761e4m   M478486IDWNNVTDREETTEEEEEbxaabaaxb
1fcq_A_2691fcq   A269277KYQDRRDTDEETTEEEEEbxaabaaxx
1pdk_B_711pdk   B7179EEAALPGHLEETTEEEEExxaabpvbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dx5_I_3761dx5   I     FMTFORMIC ACID F - 376
1dx5_I_3761dx5   I     FMTFORMIC ACID C - 386
1e4m_M_4761e4m   M     NAGN-ACETYL-D-GLUCOSAMINE N - 482
1e4m_M_4761e4m   M     NAGN-ACETYL-D-GLUCOSAMINE T - 484
1e4m_M_4761e4m   M     NAGN-ACETYL-D-GLUCOSAMINE D - 485

Clusters included in this Subclass
CLUSTER: HA.1.61