Information on SUBCLASS 6.52.1 |
Subclass Accession number: 4995
Subclass: 6.52.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005506 (>50 %) GO:0016151 (>50 %) GO:0016903 (>50 %) GO:0018492 (>50 %) GO:0046914 (>50 %) SCOP : 56820 (>50 %) 56821 (>50 %) 64514 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 15.8 +/- 19.4 Average RMSD (Å) : 0.600 +/- 0.173 Consensus geometry
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Consensus Sequence: | XpchhhXXhp |
(φψ)-conformation: | aalappabaa |
Pattern: | [EKP] | x | [FL] | [ERS] | [AKT] | [HK] | [GN] | [LVY] | [IVY] | [PV] | x | [GS] | [IL] | [DH] | x | x | [IY] | [AKS] | [EQ] |
Conservation: | -0.291 | -1.027 | 0.430 | -0.606 | -0.817 | 1.355 | 1.238 | -0.501 | -0.080 | 0.408 | -1.658 | 0.912 | 1.037 | 1.037 | -1.027 | -1.553 | 0.101 | -0.501 | 1.544 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j4a_A_181 | 1j4a | A | 181 | 199 | PELEKKGYYVDSLDDLYKQ | HHHHHTT-B-S-HHHHHHH | aaaaaavaxxabaaaaaaa |
1oao_A_192 | 1oao | A | 196 | 214 | EKFRTHNVVPFGIHASISE | HHHHHTT---SSHHHHHHH | aaaaaalaxxabaaaaaaa |
1su8_A_170 | 1su8 | A | 174 | 192 | KVLSAHGLIPAGIDHEIAE | HHHHHTT-S-S-HHHHHHH | aaaaaavaxxabaaaaaaa |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oao_A_192 | 1oao | A | AC9SO4 BINDING SITE FOR CHAIN A | K - 195 |
1oao_A_192 | 1oao | A | AC9SO4 BINDING SITE FOR CHAIN A | R - 199 |
Clusters included in this Subclass |
CLUSTER: HH.6.181 |