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Information on SUBCLASS 0.1.39
Subclass Accession number: 5226
Subclass: 0.1.39 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 10.0 +/- 13.2
Average RMSD (Å) : 0.460 +/- 0.195

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 0-45 rho (°): 180-225
Consensus Sequence: pphX
(φψ)-conformation: aabb
Pattern: x[IKM][AFK]x[dnrs][AKRS][LTVY][efkl]
Conservation:-0.0200.4280.602-1.457-0.6321.3330.904-1.157
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cb0_A_2641cb0   A272279NMAQFSVLHHHHTTEEaaaaaaxx
1hk8_A_3191hk8   A321328RIALDSYIHHHHTTEEaaaaaaxb
1j3a_A_881j3a   A9198RKAFRRLKHHHHTTEEaaaaaabb
1kic_A_1521kic   A152159EKFTSKVEHHHHTTEEaaaaaaxa
1pfo_*_3381pfo   -344351VIKDNATFHHHHT-EEaaaaaaxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kic_A_1521kic   A     CACALCIUM ION M - 164
1kic_A_1521kic   A     NOSINOSINE M - 164

Clusters included in this Subclass
CLUSTER: HE.1.66
CLUSTER: HE.3.209