Information on SUBCLASS 0.1.39 |
Subclass Accession number: 5226
Subclass: 0.1.39 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 10.0 +/- 13.2 Average RMSD (Å) : 0.460 +/- 0.195 Consensus geometry
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Consensus Sequence: | pphX |
(φψ)-conformation: | aabb |
Pattern: | x | [IKM] | [AFK] | x | [dnrs] | [AKRS] | [LTVY] | [efkl] |
Conservation: | -0.020 | 0.428 | 0.602 | -1.457 | -0.632 | 1.333 | 0.904 | -1.157 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cb0_A_264 | 1cb0 | A | 272 | 279 | NMAQFSVL | HHHHTTEE | aaaaaaxx |
1hk8_A_319 | 1hk8 | A | 321 | 328 | RIALDSYI | HHHHTTEE | aaaaaaxb |
1j3a_A_88 | 1j3a | A | 91 | 98 | RKAFRRLK | HHHHTTEE | aaaaaabb |
1kic_A_152 | 1kic | A | 152 | 159 | EKFTSKVE | HHHHTTEE | aaaaaaxa |
1pfo_*_338 | 1pfo | - | 344 | 351 | VIKDNATF | HHHHT-EE | aaaaaaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kic_A_152 | 1kic | A | CACALCIUM ION | M - 164 |
1kic_A_152 | 1kic | A | NOSINOSINE | M - 164 |
Clusters included in this Subclass |
CLUSTER: HE.1.66 |
CLUSTER: HE.3.209 |