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Information on SUBCLASS 2.4.3
Subclass Accession number: 542
Subclass: 2.4.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 13.4 +/- 14.3
Average RMSD (Å) : 0.761 +/- 0.268

Consensus geometry
d (Å): 9 delta (°): 135-180 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXpGXh
(φψ)-conformation: bbllbp
Pattern: x[agiklv]xx[DEGKNQR][GKN][aeknqr]xx[acgklmv]xx[afiltv]x
Conservation:-0.5420.279-0.137-0.5110.7473.1040.258-0.138-0.495-0.482-0.594-0.8810.069-0.678
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7s_*_151a7s   -1730SIQNQGRHFCGGALEEEETTEEEEEEEEbbbblvxxabbbbx
1bio_*_301bio   -3245SVQLNGAHLCGGVLEEEETTEEEEEEEEbxbblvbpabxbbx
1cc1_L_4261cc1   L432445LKIKDKKIENYQIVEEEETTEEEEEEEEbbbblvbxabbbbb
1dy9_A_1501dy9   A157170AVCTRGVAKAVDFIEEEETTEEEEEEEExxbblvbxabbxbx
1exm_A_3851exm   A387400AIREGGRTVGAGVVEEEETTEEEEEEEEbbbbvvbxabbbbx
1eyq_A_271eyq   A3750GLTIEGNFIKFTAIEEEETTEEEEEEEEbbxblvbxbxabxb
1fw9_A_731fw9   A7992LLSADGEPWLAGRTEEEETTEEEEEEEEbbbblvbwabbbbb
1ikt_A_321ikt   A3750HITKGGNIGAKWTIEEESSSSEEEEEEEbxbbgvxxabbbbb
1j1y_A_931j1y   A99112EVVSEGKLVALFTGEEEETTEEEEEEEExbbblvbxabbbbb
1jp4_A_1341jp4   A138151GIAYEGKAIAGIINEEEETTEEEEEEEEbbbblvbxabbbbb
1jtg_B_1461jtg   B149162LWFTDGVLQGKRQWEEEETTEEEEEEEEbbbblvbxabbbbb
1ka1_A_1571ka1   A161174ALIVDGVVQLGCIGEEEETTEEEEEEEEbbbblvbxabbbbx
1kzf_A_531kzf   A5669LGICEGQLVCSVRFEEEETTEEEEEEEEbbbblvbxabbbbb
1n9e_A_3581n9e   A363376DITFKGERIVYELSEEEETTEEEEEEEElxbblvbxababbb
1o13_A_261o13   A3043VKVKNNAIADISVEEEEETTEEEEEEEEbxbbllbxabbbxb
1pz4_A_291pz4   A3346RITQGGKVVKNWVMEEEETTEEEEEEEEbxbbvgxxabbbbb
1ssx_A_621ssx   A6275TARIGGAVVGTFAAEEEETTEEEEEEEExxbbvvbxaebxab
1xva_A_2001xva   A206219VLTVNNKAHMVTLDEEESSSSEEEEEEEbbbbllbpabbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a7s_*_151a7s   *     EOHETHANOL L - 15
1a7s_*_151a7s   *     EOHETHANOL Q - 19
1a7s_*_151a7s   *     EOHETHANOL Q - 21
1a7s_*_151a7s   *     EOHETHANOL G - 22
1a7s_*_151a7s   *     EOHETHANOL R - 23
1cc1_L_4261cc1   L     FCOCARBONMONOXIDE-(DICYANO) IRON G - 426
1cc1_L_4261cc1   L     FCOCARBONMONOXIDE-(DICYANO) IRON A - 427
1cc1_L_4261cc1   L     FCOCARBONMONOXIDE-(DICYANO) IRON L - 428
1cc1_L_4261cc1   L     FE2FE (II) ION Q - 443
1cc1_L_4261cc1   L     FE2FE (II) ION I - 444
1cc1_L_4261cc1   L     FE2FE (II) ION V - 445
1cc1_L_4261cc1   L     CSESELENOCYSTEINE S - 446
1cc1_L_4261cc1   L     FE2FE (II) ION S - 446
1cc1_L_4261cc1   L     FCOCARBONMONOXIDE-(DICYANO) IRON S - 446
1dy9_A_1501dy9   A     FKI5,5-DI-FLUORO-2-KETO-3-AMINOPENTANOIC ACID F - 154
1dy9_A_1501dy9   A     BOCTERT-BUTYLOXYCARBONYL GROUP R - 155
1dy9_A_1501dy9   A     FKI5,5-DI-FLUORO-2-KETO-3-AMINOPENTANOIC ACID R - 155
1dy9_A_1501dy9   A     BOCTERT-BUTYLOXYCARBONYL GROUP A - 156
1dy9_A_1501dy9   A     FKI5,5-DI-FLUORO-2-KETO-3-AMINOPENTANOIC ACID A - 156
1dy9_A_1501dy9   A     BOCTERT-BUTYLOXYCARBONYL GROUP A - 157
1dy9_A_1501dy9   A     FKI5,5-DI-FLUORO-2-KETO-3-AMINOPENTANOIC ACID A - 157
1dy9_A_1501dy9   A     BOCTERT-BUTYLOXYCARBONYL GROUP V - 158
1dy9_A_1501dy9   A     BOCTERT-BUTYLOXYCARBONYL GROUP C - 159
1dy9_A_1501dy9   A     BOCTERT-BUTYLOXYCARBONYL GROUP D - 168
1eyq_A_271eyq   A     SULSULFATE ANION R - 36
1eyq_A_271eyq   A     NARNARINGENIN R - 36
1eyq_A_271eyq   A     NARNARINGENIN G - 37
1eyq_A_271eyq   A     NARNARINGENIN L - 38
1eyq_A_271eyq   A     SULSULFATE ANION F - 44
1eyq_A_271eyq   A     SULSULFATE ANION I - 45
1eyq_A_271eyq   A     SULSULFATE ANION K - 46
1eyq_A_271eyq   A     NARNARINGENIN F - 47
1eyq_A_271eyq   A     NARNARINGENIN T - 48
1eyq_A_271eyq   A     NARNARINGENIN A - 49
1eyq_A_271eyq   A     NARNARINGENIN I - 50
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID R - 76
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID I - 78
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID L - 80
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID L - 88
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID A - 89
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID G - 90
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID R - 91
1fw9_A_731fw9   A     PHBP-HYDROXYBENZOIC ACID T - 92
1ikt_A_321ikt   A     OXNOXTOXYNOL-10 W - 36
1ikt_A_321ikt   A     OXNOXTOXYNOL-10 I - 50
1jp4_A_1341jp4   A     MGMAGNESIUM ION L - 136
1n9e_A_3581n9e   A     CACALCIUM ION Y - 373
1n9e_A_3581n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE A - 382
1n9e_A_3581n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE Y - 384
1n9e_A_3581n9e   A     CUCOPPER (II) ION Y - 384
1o13_A_261o13   A     MSESELENOMETHIONINE V - 30
1o13_A_261o13   A     MSESELENOMETHIONINE K - 31
1o13_A_261o13   A     MSESELENOMETHIONINE V - 32
1o13_A_261o13   A     MSESELENOMETHIONINE K - 33
1pz4_A_291pz4   A     PLMPALMITIC ACID F - 32
1pz4_A_291pz4   A     PLMPALMITIC ACID M - 46
1xva_A_2001xva   A     SAMS-ADENOSYLMETHIONINE K - 200
1xva_A_2001xva   A     SAMS-ADENOSYLMETHIONINE I - 202
1xva_A_2001xva   A     SAMS-ADENOSYLMETHIONINE L - 218
1xva_A_2001xva   A     SAMS-ADENOSYLMETHIONINE Y - 220

Clusters included in this Subclass
CLUSTER: HA.1.26
CLUSTER: HA.1.33
CLUSTER: HA.2.30
CLUSTER: HA.3.35