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Information on SUBCLASS 3.2.11
Subclass Accession number: 5468
Subclass: 3.2.11 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 8.1 +/- 10.8
Average RMSD (Å) : 0.560 +/- 0.055

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: ppchXhX
(φψ)-conformation: aalbpbb
Pattern: xxx[ait][HKQRT][gkl][AFILY][aek]x[ERST]x[GKN][ALVW][EHNP][ACFIV][amt]
Conservation:-1.509-0.5960.157-0.4470.547-1.5970.166-0.204-0.5720.6390.0142.776-0.2040.8610.014-0.043
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1avq_A_751avq   A86101NDARTLFEFTSGVNVTHHHHHHHHHHH---EEaaaaaaaaaaavbxbb
1b5t_A_641b5t   A7186HSIIKGIKDRTGLEAAHHHHHHHHHHH---EEaaaaaaaaaaavxxbb
1dkr_A_1781dkr   A178193VTRARKLADRLKAPIAHHHHHHHHHHHT--EEaaaaaaaaaaavbxbb
1kek_A_1461kek   A153168ALVAHLAAIESNVPFMHHHHHHHHHHH---EEaaaaaaaaaaavbxbb
1o63_A_1101o63   A110125PNVTQRYCESKGWHCRHHHHHHHHHHHT--EEaaaaaaaaaaavxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5t_A_641b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 88
1b5t_A_641b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 89
1o63_A_1101o63   A     MSESELENOMETHIONINE V - 112

Clusters included in this Subclass
CLUSTER: HE.3.131