Information on SUBCLASS 3.3.8 |
Subclass Accession number: 5483
Subclass: 3.3.8 ![]() Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation GO : GO:0016772 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 13.9 +/- 13.3 Average RMSD (Å) : 0.667 +/- 0.058 Consensus geometry
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Consensus Sequence: | XhpXXXX |
(φψ)-conformation: | aalpabb |
Pattern: | x | [DGN] | [IL] | [IL] | x | [ALY] | [NQ] | [PT] | [DP] | x | x | x |
Conservation: | -1.212 | 0.073 | 0.974 | 0.976 | -0.845 | -0.937 | 1.029 | 1.056 | 0.849 | -1.304 | -0.661 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i6l_A_131 | 1i6l | A | 131 | 142 | ADILLYNTDIVP | HHHHTTT-SEEE | aaaaaalxabbx |
1knx_A_76 | 1knx | A | 77 | 88 | HNLLKLNPPAII | HHHHTT--S-EE | aaaaaavxabbx |
1vrt_A_500 | 1vrt | A | 503 | 513 | LGIIQAQPDQS. | HHHHHT--SEE. | aaaaaalxabb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | A - 131 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | D - 132 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | D - 132 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | I - 133 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | I - 133 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | L - 134 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | L - 135 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | Y - 136 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | N - 137 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | D - 139 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | V - 141 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | V - 141 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | P - 142 |
Clusters included in this Subclass |
CLUSTER: HE.5.335 |