Information on SUBCLASS 4.3.9 |
Subclass Accession number: 5612
Subclass: 4.3.9 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2 (>75 %) SCOP : 52539 (>75 %) 52540 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 13.3 +/- 16.3 Average RMSD (Å) : 0.925 +/- 0.206 Consensus geometry
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Consensus Sequence: | pXhphPhh |
(φψ)-conformation: | aapabpbb |
Pattern: | x | x | [DKN] | [KL] | [IL] | [KRS] | x | x | [DEKR] | [ACFG] | [PQ] | [LV] | x | x | x |
Conservation: | -0.585 | -0.686 | 0.682 | 0.041 | 1.598 | 0.677 | -0.686 | -1.039 | 0.273 | -0.736 | 2.042 | 1.032 | -0.736 | -0.938 | -0.938 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ega_A_103 | 1ega | A | 108 | 122 | VLNKLREGKAPVILA | HHHHHHSSSS-EEEE | aaaaaaabaxxbxxb |
1hgx_A_50 | 1hgx | A | 53 | 67 | YTDLLKHLDFQLEPD | HHHHHTT--S--EEE | aaaaaaaxabxbbwb |
1ny5_A_144 | 1ny5 | A | 152 | 166 | KIKKISCAECPVLIT | HHHHHTT--S-EEEE | aaaaaaabaxxbbxb |
1v93_A_3 | 1v93 | A | 3 | 17 | IRDLLKARRGPLFSF | HHHHHHT-SS-EEEE | aaaaaaaxabpxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ny5_A_144 | 1ny5 | A | ADPADENOSINE-5'-DIPHOSPHATE | M - 146 |
1v93_A_3 | 1v93 | A | DOXDIOXANE | P - 13 |
1v93_A_3 | 1v93 | A | DOXDIOXANE | L - 14 |
1v93_A_3 | 1v93 | A | DOXDIOXANE | F - 15 |
1v93_A_3 | 1v93 | A | DOXDIOXANE | S - 16 |
1v93_A_3 | 1v93 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 18 |
Clusters included in this Subclass |
CLUSTER: HE.6.113 |