Information on SUBCLASS 4.6.1 |
Subclass Accession number: 5622
Subclass: 4.6.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 20.6 +/- 19.6 Average RMSD (Å) : 0.756 +/- 0.283 Consensus geometry
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Consensus Sequence: | XXXPpXhX |
(φψ)-conformation: | aabaaabb |
Pattern: | x | [acflvy] | [afgklv] | x | x | x | [PT] | [DEGKNQS] | x | [flvy] | x | x |
Conservation: | -0.346 | -0.231 | -0.524 | -0.400 | -0.402 | -0.185 | 2.972 | 0.457 | -0.455 | 0.366 | -0.746 | -0.506 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aui_A_126 | 1aui | A | 135 | 146 | ALKILYPKTLFL | HHHHHSTTTEEE | aaaaabaaabbb |
1c4x_A_111 | 1c4x | A | 118 | 129 | QLVVEAPERFDK | HHHHH-GGGEEE | aaaaabaaabax |
1cjw_A_67 | 1cjw | A | 72 | 83 | HFLTLCPELSLG | HHHHH-GGGEEE | aaaaabaaabbb |
1cvl_*_89 | 1cvl | - | 95 | 106 | YVAAVAPQLVAS | HHHHH-GGGEEE | aaaaabaaabab |
1dtd_A_371 | 1dtd | A | 380 | 391 | NLVAEHPGLVSK | HHHHH-TTTEEE | aaaaabaaabbb |
1fxd_*_13 | 1fxd | - | 13 | 24 | ACVEICPDVFEM | HHHHH-TTTEEE | aaaaabaaabbx |
1fxr_A_16 | 1fxr | A | 16 | 27 | SCVEIAPGAFAM | HHHHH-TTTEEE | aaaaabaaabbx |
1gky_*_14 | 1gky | - | 20 | 31 | KLFAEYPDSFGF | HHHHH-TTTEEE | aaaaabaaabbx |
1iqz_A_16 | 1iqz | A | 16 | 27 | ACGAAAPDIYDY | HHHHH-TTTEEE | aaaaabaaabbb |
1jk7_A_100 | 1jk7 | A | 109 | 120 | AYKIKYPENFFL | HHHHHSTTTEEE | aaaaabaaabbb |
1kic_A_13 | 1kic | A | 20 | 31 | VLLASNTEKVRL | HHHHH-TTTEEE | aaaaaxaaabbx |
1q44_A_205 | 1q44 | A | 214 | 225 | YASRENPNKVLF | HHHHH-TTTEEE | aaaaabaaabbb |
1qtr_A_114 | 1qtr | A | 121 | 132 | AYAQTHPERVSE | HHHTT-TTSEEE | aaaaabaaabab |
1vjw_*_15 | 1vjw | - | 15 | 26 | VCENLCPDVFQL | HHHHH-TTTEEE | aaaaabaaabbx |
2hgs_A_345 | 2hgs | A | 352 | 363 | AEALAAPSRFVL | HHHHHSGGGEEE | aaaaabaaabbb |
4lip_D_88 | 4lip | D | 95 | 106 | YVAAVAPDLVAS | HHHHH-GGGEEE | aaaaabaaabab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
4lip_D_88 | 4lip | D | OXDOXYANION HOLE | Q - 88 |
Clusters included in this Subclass |
CLUSTER: HE.3.54 |
CLUSTER: HE.4.62 |
CLUSTER: HE.5.263 |