Information on SUBCLASS 4.19.1 |
Subclass Accession number: 5662
Subclass: 4.19.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 14.3 +/- 14.2 Average RMSD (Å) : 0.922 +/- 0.291 Consensus geometry
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Consensus Sequence: | XXGhppXh |
(φψ)-conformation: | aagpapbb |
Pattern: | [afilmvw] | x | x | [filmtv] | x | x | x | [AIL] | [ADEKNQR] | [aekqr] | x | [GN] | [CILV] | [hknrt] | [DNRST] | x | [fitvy] | x | x | [cgilpv] |
Conservation: | -0.419 | -0.665 | -0.651 | -0.059 | -0.628 | -0.572 | -0.357 | 0.922 | 0.045 | -0.115 | -0.372 | 3.566 | 1.215 | 0.158 | 0.393 | -0.366 | -0.148 | -0.252 | -0.647 | -1.045 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aln_*_273 | 1aln | - | 273 | 292 | WDATSATLKALGCHSIDRVL | HHHHHHHHHHHT---EEEEE | aaaaaaaaaaagxabbbbbx |
1ihu_A_209 | 1ihu | A | 215 | 234 | VARTHLELAAIGLKNQYLVI | HHHHHHHHHHHT---EEEEE | aaaaaaaaaaagxabbbbbx |
1jyk_A_38 | 1jyk | A | 39 | 58 | IEYQIEFLKEKGINDIIIIV | HHHHHHHHHHTT---EEEEE | aaaaaaaaaaavxaxbbbxb |
1k4k_A_17 | 1k4k | A | 20 | 39 | LKPVETLANLIGLTRVTIIP | HHHHHHHHHHH----EEEEE | aaaaaaaaaaavxabbbxbx |
1k66_A_16 | 1k66 | A | 19 | 38 | FSTFQRLLQREGVVNPIYRC | HHHHHHHHHHTTB-S-EEEE | aaaaaaaaaaavxaxwbbbb |
1mow_A_45 | 1mow | A | 53 | 72 | APRMQFLIDELNVKSKIQIV | HHHHHHHHHHHT--S-EEEE | aaaaaaaaaaavxaxxxbbb |
1o98_A_126 | 1o98 | A | 129 | 148 | LYALLRLAAKEGVKRVYIHG | HHHHHHHHHHTT---EEEEE | aaaaaaaaaaavxabbbbbx |
2liv_*_203 | 2liv | - | 206 | 225 | MGQILRQARAAGLKTQFMGP | HHHHHHHHHHTT---EEEEE | aaaaaaaaaaavxapxbbbx |
4tmk_A_16 | 4tmk | A | 20 | 39 | RNVVVETLEQLGIRDMVFTR | HHHHHHHHHHTT---EEEEE | aaaaaaaaaaavbaxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o98_A_126 | 1o98 | A | AC8SO4 BINDING SITE FOR CHAIN A | R - 134 |
Clusters included in this Subclass |
CLUSTER: HE.3.248 |
CLUSTER: HE.5.96 |