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Information on SUBCLASS 4.34.2
Subclass Accession number: 5690
Subclass: 4.34.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 9.4 +/- 10.9
Average RMSD (Å) : 1.125 +/- 0.171

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhXphXXX
(φψ)-conformation: aabappbb
Pattern: [KQW]x[TV]xx[ATV]x[ESW]xx[DNSY][GLV][GPT]x[CERT]x
Conservation:1.253-0.6962.264-0.9950.1051.444-0.0800.354-0.895-0.597-0.000-0.7510.980-0.696-0.895-0.796
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bif_*_3041bif   -304319KRTIQTAEALSVPYEQHHHHHHHTTSSS--EEaaaaaaaaaxaxwbbx
1f6y_A_531f6y   A5974WLVEVTQEVSNLTLCLHHHHHHHTT--SEEEEaaaaaaaaabaxpbbx
1hk8_A_1051hk8   A114129QITAQVASHQYGGTTFHHHHHHHTTSSS-EEEaaaaaaaaababxbbb
1qmh_A_991qmh   A104119QTVLPALWFADGPSRVHHHHHHHTTSSS-EEEaaaaaaaaaxabwbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bif_*_3041bif   *     PO4PHOSPHATE ION R - 305
1hk8_A_1051hk8   A     DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE G - 106
1hk8_A_1051hk8   A     DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE V - 107
1hk8_A_1051hk8   A     DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE A - 110
1hk8_A_1051hk8   A     DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE I - 111
1hk8_A_1051hk8   A     DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE Q - 114
1qmh_A_991qmh   A     CITCITRIC ACID L - 101
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hk8_A_1051hk8   A DG1DGT BINDING SITE FOR CHAIN AI - 111

Clusters included in this Subclass
CLUSTER: HE.6.122
CLUSTER: HE.7.186