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Information on SUBCLASS 4.72.1
Subclass Accession number: 5732
Subclass: 4.72.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.3 (>75 %)  2.3.1 (>75 %)  2.3.1.412.7 (>50 %)  
GO : GO:0008415 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  
SCOP : 53900 (>75 %)  53901 (>75 %)  53902 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 21.6 +/- 16.8
Average RMSD (Å) : 1.000 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hhGDXXXh
(φψ)-conformation: aaeapabb
Pattern: x[ASV]xx[AGP][EL][AKN][AIL][AIL][G][D][AK][PQT][QTW][AV]x[VY]
Conservation:-0.736-0.409-0.736-0.671-0.343-0.509-0.474-0.278-0.2782.4732.4730.006-0.343-0.3430.201-0.7350.704
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bjn_A_751bjn   A8096FAAVPLNILGDKTTADYHHHHHHHH-TT--EEEEaaaaaaaaaeaxabbxb
1cbu_A_121cbu   A1228KSRHAEALIGDAPQVLYHHHHHHHHHTT-SEEEEaaaaaaaaaeaxabbbx
1i52_A_851i52   A88104SVLAGLKAAGDAQWVLVHHHHHHHTSTT-SEEEEaaaaaaaaaeapabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bjn_A_751bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 75
1bjn_A_751bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 76
1bjn_A_751bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) R - 77
1bjn_A_751bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 78
1bjn_A_751bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) F - 80
1i52_A_851i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 85
1i52_A_851i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE S - 88
1i52_A_851i52   A     CTPCYTIDINE-5'-TRIPHOSPHATE V - 89

Clusters included in this Subclass
CLUSTER: HE.5.318