Information on SUBCLASS 4.78.1 |
Subclass Accession number: 5738
Subclass: 4.78.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.0 +/- 12.4 Average RMSD (Å) : 1.100 +/- 0.200 Consensus geometry
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Consensus Sequence: | XXXNXXhh |
(φψ)-conformation: | aallppbb |
Pattern: | x | [ENQ] | [ADQ] | [AGI] | x | [AN] | [LV] | x | [AR] | [AGQ] | [CSW] | [CGT] | [N] | [CNV] | x | [AFL] | [LP] | x |
Conservation: | -0.773 | 0.651 | -0.270 | -0.689 | -0.689 | 0.122 | 0.975 | -0.521 | 0.372 | -0.270 | -0.019 | -0.354 | 3.499 | -0.605 | -0.186 | -0.354 | -0.117 | -0.773 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c1y_A_128 | 1c1y | A | 128 | 145 | KEQGQNLARQWCNCAFLE | HHHHHHHHHHTTS-EEEE | aaaaaaaaaaallppbbb |
1jye_A_130 | 1jye | A | 130 | 147 | DQDAIAVEAACTNVPALF | HHHHHHHHHHTTTS-EEE | aaaaaaaaaaalvxpbbb |
1tca_*_76 | 1tca | - | 84 | 101 | VNAITALYAGSGNNKLPV | HHHHHHHHHHTTS--EEE | aaaaaaaaaaavlbxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | Q - 77 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 78 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 79 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | Y - 82 |
Clusters included in this Subclass |
CLUSTER: HE.4.208 |