Information on SUBCLASS 5.8.1 |
Subclass Accession number: 5767
Subclass: 5.8.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 23.8 +/- 20.5 Average RMSD (Å) : 0.660 +/- 0.310 Consensus geometry
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Consensus Sequence: | XphpXGpXh |
(φψ)-conformation: | aapbpgpbb |
Pattern: | [adekqt] | [ekns] | [aglm] | [AILV] | x | [ehkqt] | [KLM] | [hkrsty] | x | [G] | [ADEQS] | x | [ACIVW] | x |
Conservation: | -0.451 | -0.455 | -0.344 | 0.448 | -0.695 | -0.371 | 0.885 | -0.508 | -0.436 | 3.068 | 0.393 | -0.561 | -0.310 | -0.664 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bkf_*_57 | 1bkf | - | 60 | 73 | EEGVAQMSVGQRAK | HHHHTT--TT-EEE | aaaaaabbxvxbbx |
1h2b_A_169 | 1h2b | A | 178 | 191 | KKAARTLYPGAYVA | HHHHTT--TT-EEE | aaaaaaxbxgxbbx |
1jvw_A_121 | 1jvw | A | 124 | 137 | TEALQLMREGDRWR | HHHHTT--TT-EEE | aaaaaabbpvxbbx |
1l7d_A_278 | 1l7d | A | 278 | 291 | EEMVTKMKPGSVII | HHHHTTS-TT-EEE | aaaaaaxxpvxbbb |
1n1a_A_88 | 1n1a | A | 91 | 104 | DIAIATMKVGEVCH | HHHHTT--TT-EEE | aaaaaaxxxvxbbb |
1o54_A_43 | 1o54 | A | 43 | 56 | LNEVFEKGPGEIIR | HHHHTTS-TT-EEE | aaaaaabbxvxxbb |
1okg_A_336 | 1okg | A | 339 | 352 | QSAATHLHAGEAAT | HHHHTT-BTT-EEE | aaaaaabbpvxbbx |
1pbk_*_173 | 1pbk | - | 176 | 189 | DEALLTMSKGEKAR | HHHHTT--TT-EEE | aaaaaaxbpgxbbb |
1r9h_A_71 | 1r9h | A | 74 | 87 | DLGVATMTKGEVAE | HHHHTT--BT-EEE | aaaaaaxbpvxbbb |
1say_A_251 | 1say | A | 251 | 264 | ASLVEQMRTGSVIV | HHHHTTS-TT-EEE | aaaaaaxxxvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.8.8 |