Information on SUBCLASS 5.64.1 |
Subclass Accession number: 5843
Subclass: 5.64.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.8 +/- 12.8 Average RMSD (Å) : 0.933 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXpXXpXXh |
(φψ)-conformation: | aabaababb |
Pattern: | x | [EF] | x | x | [SV] | x | x | x | [EFL] | x | [DY] | [DPS] | x | [DT] | [FHR] | [LT] | [LMV] |
Conservation: | -0.978 | 0.457 | -1.131 | -0.366 | 0.202 | -1.131 | -0.366 | -0.825 | -1.131 | -0.366 | 1.259 | 0.400 | -0.825 | 1.709 | 0.094 | 1.373 | 1.624 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bqb_A_161 | 1bqb | A | 169 | 185 | SFSDVFGYFVDDEDFLM | HHHHHHHHHHSTT-SEE | aaaaaaaaaaxaababb |
1o50_A_23 | 1o50 | A | 23 | 39 | IEEIVDRILEDPVTRTV | HHHHHHHHHHSTT--EE | aaaaaaaaaabaaxabx |
1pfo_*_151 | 1pfo | - | 159 | 175 | DELVSKWNEKYSSTHTL | HHHHHHHHHHTTT--EE | aaaaaaaaaabaababb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bqb_A_161 | 1bqb | A | ZNZINC ION | N - 167 |
1bqb_A_161 | 1bqb | A | ZNZINC ION | E - 168 |
1bqb_A_161 | 1bqb | A | ZNZINC ION | S - 171 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | G - 175 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | D - 179 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | E - 181 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | D - 182 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | F - 183 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | L - 184 |
1bqb_A_161 | 1bqb | A | CACALCIUM ION | M - 185 |
Clusters included in this Subclass |
CLUSTER: HE.5.301 |