Information on SUBCLASS 6.21.1 |
Subclass Accession number: 5886
Subclass: 6.21.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 16.4 +/- 16.9 Average RMSD (Å) : 1.020 +/- 0.268 Consensus geometry
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Consensus Sequence: | pXGhpPcpph |
(φψ)-conformation: | aalpbpappb |
Pattern: | [DGPT] | x | [agl] | [ARST] | [asv] | x | [ae] | [GITV] | [AIMY] | x | x | [ALVY] | x | [AEQR] | x | [GN] | [fly] | [KQ] | [CP] | [DKT] | [krs] | [HKQS] | [FILW] | [ADRST] | [FIT] |
Conservation: | -0.577 | -0.916 | -0.526 | -0.068 | -0.404 | -1.206 | -0.420 | -0.460 | -0.571 | -0.066 | -0.967 | -0.341 | -0.541 | 0.236 | -0.850 | 2.816 | -0.048 | 1.994 | 2.307 | 0.427 | 0.060 | 0.242 | 0.100 | -0.648 | 0.428 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aco_*_363 | 1aco | - | 365 | 389 | DMGRSAAVAKQALAHGLKCKSQFTI | HHHHHHHHHHHHHHTT---SSEEEE | aaaaaaaaaaaaaaavbbxaxxbbb |
1hrk_A_199 | 1hrk | A | 199 | 223 | TGSSLNAIYRYYNQVGRKPTMKWST | HHHHHHHHHHHHHHHTS--SSEEEE | aaaaaaaaaaaaaaavbxxabxxbb |
1lfw_A_121 | 1lfw | A | 123 | 147 | PSLTAYYGMLLLKEAGFKPKKKIDF | HHHHHHHHHHHHHHHT---SSEEEE | aaaaaaaaaaaaaaavxbpabxbbx |
1qq9_A_99 | 1qq9 | A | 101 | 125 | GSAAVLETALAVSRAGYQPDKHLRF | HHHHHHHHHHHHHHHT---SEEEEE | aaaaaaaaaaaaaaavxbxaxxxbb |
1rtq_A_119 | 1rtq | A | 121 | 145 | GIAAVTEVIRVLSENNFQPKRSIAF | HHHHHHHHHHHHHHTT---SEEEEE | aaaaaaaaaaaaaaalxbxaxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1rtq_A_119 | 1rtq | A | SCNTHIOCYANATE ION | N - 135 |
Clusters included in this Subclass |
CLUSTER: HE.6.107 |
CLUSTER: HE.7.81 |