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Information on SUBCLASS 6.24.1
Subclass Accession number: 5889
Subclass: 6.24.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 29.4 +/- 28.1
Average RMSD (Å) : 0.850 +/- 0.289

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hhGhpchhhX
(φψ)-conformation: aalpblppbb
Pattern: [ANT][AR][CQR]x[IV][aq][DRS][ILMV][AL][G][IL][ktv][DG][CPV][LP][AIV][af]
Conservation:-0.4180.013-0.463-1.1461.146-0.722-0.5500.308-0.1862.8650.861-0.9490.705-0.7200.2390.068-1.050
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ezr_A_421ezr   A4864NARLVADVAGIVGVPVAHHHHHHHHTT--S--EEaaaaaaaaalxbvbxbb
1hnj_A_901hnj   A90106AACQIQSMLGIKGCPAFHHHHHHHHHT--SS-EEaaaaaaaaavbbgxwbb
1oyw_A_1861oyw   A188204TRQDIVRLLGLNDPLIQHHHHHHHHHT--S-EEEaaaaaaaaavxxlxxbb
2mas_A_422mas   A4864NAQLVADIAGITGVPIAHHHHHHHHTT--S--EEaaaaaaaaalxbvbwbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oyw_A_1861oyw   A     MSESELENOMETHIONINE L - 196
1oyw_A_1861oyw   A     MSESELENOMETHIONINE L - 198
1oyw_A_1861oyw   A     MSESELENOMETHIONINE Q - 204

Clusters included in this Subclass
CLUSTER: HE.6.200
CLUSTER: HE.7.203