Information on SUBCLASS 6.24.1 |
Subclass Accession number: 5889
Subclass: 6.24.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 29.4 +/- 28.1 Average RMSD (Å) : 0.850 +/- 0.289 Consensus geometry
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Consensus Sequence: | hhGhpchhhX |
(φψ)-conformation: | aalpblppbb |
Pattern: | [ANT] | [AR] | [CQR] | x | [IV] | [aq] | [DRS] | [ILMV] | [AL] | [G] | [IL] | [ktv] | [DG] | [CPV] | [LP] | [AIV] | [af] |
Conservation: | -0.418 | 0.013 | -0.463 | -1.146 | 1.146 | -0.722 | -0.550 | 0.308 | -0.186 | 2.865 | 0.861 | -0.949 | 0.705 | -0.720 | 0.239 | 0.068 | -1.050 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ezr_A_42 | 1ezr | A | 48 | 64 | NARLVADVAGIVGVPVA | HHHHHHHHTT--S--EE | aaaaaaaaalxbvbxbb |
1hnj_A_90 | 1hnj | A | 90 | 106 | AACQIQSMLGIKGCPAF | HHHHHHHHHT--SS-EE | aaaaaaaaavbbgxwbb |
1oyw_A_186 | 1oyw | A | 188 | 204 | TRQDIVRLLGLNDPLIQ | HHHHHHHHHT--S-EEE | aaaaaaaaavxxlxxbb |
2mas_A_42 | 2mas | A | 48 | 64 | NAQLVADIAGITGVPIA | HHHHHHHHTT--S--EE | aaaaaaaaalxbvbwbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oyw_A_186 | 1oyw | A | MSESELENOMETHIONINE | L - 196 |
1oyw_A_186 | 1oyw | A | MSESELENOMETHIONINE | L - 198 |
1oyw_A_186 | 1oyw | A | MSESELENOMETHIONINE | Q - 204 |
Clusters included in this Subclass |
CLUSTER: HE.6.200 |
CLUSTER: HE.7.203 |