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Information on SUBCLASS 8.13.1
Subclass Accession number: 5977
Subclass: 8.13.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.372 (>50 %)  7 (>50 %)  
GO : GO:0004672 (>75 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016614 (>75 %)  GO:0016615 (>75 %)  GO:0016616 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0030060 (>50 %)  GO:0030554 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51848 (>75 %)  56111 (>75 %)  56112 (>75 %)  88854 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 57.6 +/- -3.7
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: KpAPphPXpNFp
(φψ)-conformation: aabaabpaaabb
Pattern: [AC][N][T][N][AC][LY][IT][AC]x[K][NS][A][P][DS][IL][P][AK][EK][N][F][HST][AC]
Conservation:-0.4681.1840.6491.184-0.455-0.913-1.095-0.468-1.3720.649-0.4810.1141.719-0.741-0.3981.719-1.095-0.3941.1841.184-1.253-0.455
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b8p_A_1361b8p   A136157ANTNAYIAMKSAPSLPAKNFTAHHHHHHHHHHT-TTS-GGGEEEaaaaaaaaaaabaabxaaabbb
4mdh_A_1324mdh   A132153ANTNCLTASKSAPSIPKENFSCHHHHHHHHHHT-TTS-GGGEEEaaaaaaaaaaabaaxpaaabbb
7mdh_A_1757mdh   A175196CNTNALICLKNAPDIPAKNFHAHHHHHHHHHHT-TTS-GGGEEEaaaaaaaaaaabaabpaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
4mdh_A_1324mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 132
7mdh_A_1757mdh   A     ZNZINC ION C - 175
7mdh_A_1757mdh   A     ZNZINC ION N - 176
7mdh_A_1757mdh   A     ZNZINC ION L - 180
7mdh_A_1757mdh   A     ZNZINC ION K - 184
7mdh_A_1757mdh   A     ZNZINC ION A - 196

Clusters included in this Subclass
CLUSTER: HE.8.97