Information on SUBCLASS 10.3.1 |
Subclass Accession number: 5999
Subclass: 10.3.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.5 (>75 %) 1.5.1 (>75 %) 1.5.1.33.1 (>75 %) 3.1.1 (>75 %) 3.1.1.4 (>75 %) GO : GO:0004146 (>75 %) GO:0005509 (>75 %) GO:0016298 (>75 %) GO:0016645 (>75 %) GO:0016646 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) SCOP : 48618 (>75 %) 48619 (>75 %) 48623 (>75 %) 53596 (>75 %) 53597 (>75 %) 53598 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 62.8 +/- 25.4 Average RMSD (Å) : 0.714 +/- 0.495 Consensus geometry
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Consensus Sequence: | GcXTGCXPKXpXYp |
(φψ)-conformation: | aapbgbbaaappbb |
Pattern: | [AR] | [CT] | [CD] | [QR] | [CT] | [CH] | [f] | [NV] | [CH] | [DY] | [CG] | [AC] | [GY] | [EG] | [GKR] | [SV] | [KRT] | [G] | [C] | [ADN] | [P] | [K] | [ilmw] | [ADR] | x | [Y] | [ST] | [FY] | [QS] | x | [DEKQS] |
Conservation: | -0.486 | -0.057 | -0.297 | 0.124 | 0.440 | 0.198 | -0.480 | -0.851 | 0.074 | -0.419 | 0.076 | 0.592 | -0.295 | -0.149 | -0.733 | -0.760 | -0.552 | 1.434 | 2.811 | -0.694 | 1.893 | 0.975 | -1.099 | -1.023 | -1.189 | 1.893 | 0.014 | 1.081 | -0.274 | -1.571 | -0.681 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jia_A_40 | 1jia | A | 40 | 70 | ATDRCCFVHDCCYEKVTGCDPKWDDYTYSWK | HHHHHHHHHHHHHHT--SS-TTTS---EEEE | aaaaaaaaaaaaaaaxbgbxaaaxxbbbbbb |
1jlt_B_40 | 1jlt | B | 40 | 70 | ATDRCCFVHDCCYGRVRGCNPKLAIYSYSFK | HHHHHHHHHHHHHHT--SS-TTT----EEEE | aaaaaaaaaaaaaaaxbgbxaaaxbbxbbxb |
1m8r_A_40 | 1m8r | A | 40 | 70 | ATDRCCFVHDCCYGKVTGCDPKMDVYSFSEE | HHHHHHHHHHHHHHT--SS-TTT---EEEEE | aaaaaaaaaaaaaaaxbgbbaaaxxbbbbbb |
1oqs_B_40 | 1oqs | B | 40 | 70 | ATDRCCFVHDCCYGGVKGCNPKLAIYSYSFQ | HHHHHHHHHHHHHHT--SS-TTT----EEEE | aaaaaaaaaaaaaaaxbvbbaaaxbbbbbbb |
1ows_B_40 | 1ows | B | 43 | 73 | RCCQTHDNCYGAGGGSTGCAPKSRTYTYQCS | HHHHHHHHHHHHHHTSTT--TTT----EEEE | aaaaaaaaaaaaaaaxpUxbaaaxxbbbbbb |
1umv_X_39 | 1umv | X | 39 | 69 | ATDRCCFVHDCCYGKVTGCNPKIDSYTYSKK | HHHHHHHHHHHHHHT--SS-TTT----EEEE | aaaaaaaaaaaaaaaxbgbbaaaxxbbbbbb |
1vap_A_39 | 1vap | A | 39 | 69 | ATDRCCFVHDCCYGKVTGCNPKMDIYTYSVD | HHHHHHHHHHHHHHT--SS-TTT----EEEE | aaaaaaaaaaaaaaaxbvbbaaaxxbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jia_A_40 | 1jia | A | CACALCIUM ION | C - 45 |
1jia_A_40 | 1jia | A | CACALCIUM ION | D - 49 |
1jlt_B_40 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | C - 45 |
1jlt_B_40 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | H - 48 |
1jlt_B_40 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | D - 49 |
1jlt_B_40 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | Y - 52 |
1m8r_A_40 | 1m8r | A | CDCADMIUM ION | C - 45 |
1m8r_A_40 | 1m8r | A | BU11,4-BUTANEDIOL | C - 45 |
1m8r_A_40 | 1m8r | A | CDCADMIUM ION | F - 46 |
1m8r_A_40 | 1m8r | A | BU11,4-BUTANEDIOL | H - 48 |
1m8r_A_40 | 1m8r | A | CDCADMIUM ION | D - 49 |
1m8r_A_40 | 1m8r | A | BU11,4-BUTANEDIOL | D - 49 |
1umv_X_39 | 1umv | X | CACALCIUM ION | C - 44 |
1umv_X_39 | 1umv | X | CACALCIUM ION | F - 45 |
1umv_X_39 | 1umv | X | CACALCIUM ION | D - 48 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1jia_A_40 | 1jia | A | ATAACTIVE SITE. | H - 48 |
1umv_X_39 | 1umv | X | AC1CA BINDING SITE FOR CHAIN X | D - 48 |
Clusters included in this Subclass |
CLUSTER: HE.12.3 |
CLUSTER: HE.14.2 |