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Information on SUBCLASS 2.3.7
Subclass Accession number: 6108
Subclass: 2.3.7 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 27

Average sequence ID (%) : 13.3 +/- 16.8
Average RMSD (Å) : 0.278 +/- 0.101

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXcppX
(φψ)-conformation: bbeabb
Pattern: [afgilvwy]xx[degnq][adegknqst][dehknqrst]x
Conservation:-0.825-0.842-0.2302.0030.552-0.219-0.438
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3k_*_1451a3k   -149155FQRGNDVEEETTEExbbeaxb
1b0u_A_71b0u   A1420KRYGGHEEEETTEEbbbeaxx
1brt_*_21brt   -612GQENSTSEEETTEEebbeabx
1ccz_A_261ccz   A2834WKKQKDKEEETTEEbbbeabx
1d2e_A_4211d2e   A424430LRDGNRTEEETTEEbbbeabx
1es6_A_711es6   A8187VISGPKVEEETTEExbbeaxx
1ghe_A_621ghe   A6773VAEDDNVEEETTEEbbbeaxx
1h30_A_5521h30   A555561LAVEHTAEEETTEEbbbeaxx
1iam_*_1191iam   -123129LLRGEKEEEETTEEbbbeaxx
1iar_B_741iar   B7884LWAGQQLEEETTEExbbeabx
1jz7_A_2541jz7   A260266LWQGETQEEETTEEbbbeabx
1k5n_A_211k5n   A2632GYVDDTLEEETTEEbbbeabx
1l4i_A_1501l4i   A155161LKAGNKSEEETTEExbbeaxx
1ldn_A_1981ldn   A204210AYIGVMPEEETTEEbbbeabp
1ljo_A_421ljo   A4955ECKGEEKEEETTEExbbeaxx
1m6i_A_5621m6i   A567573YLRDKVVEEETTEEbbbeabx
1mu2_A_3371mu2   A341347IHQEEKIEEETTEExbbeaxx
1n67_A_2971n67   A297303IMAGDQVEEETTEExbbeabx
1n7v_A_3761n7v   A382388QLQDNSVEEETTEEbbbeabx
1oey_J_2381oey   J244250YYEDTISEEETTEEbxbeabb
1p4p_A_2451p4p   A248254ISADSKKEEETTEEbbbeabx
1q1r_A_3601q1r   A365371YLQGDRVEEETTEEbbbeaxx
1umz_A_1381umz   A141147FLVDDVPEEETTEEbbbeaxw
1vca_A_1241vca   A128134LLKGDHLEEETTEEbbbeabx
1ygs_*_3221ygs   -328334YFEMDVQEEETTEEbbbeabx
1zxq_*_1211zxq   -125131LFRGNETEEETTEEbbbeabx
3fru_A_243fru   A2834GWLGAQQEEETTEEbbbeabx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a3k_*_1451a3k   *     GALD-GALACTOSE H - 158
1a3k_*_1451a3k   *     GALD-GALACTOSE N - 160
1a3k_*_1451a3k   *     GALD-GALACTOSE R - 162
1a3k_*_1451a3k   *     NAGN-ACETYL-D-GLUCOSAMINE R - 162
1b0u_A_71b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE Y - 16
1b0u_A_71b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE H - 19
1b0u_A_71b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 21
1ghe_A_621ghe   A     MSESELENOMETHIONINE L - 74
1ghe_A_621ghe   A     MSESELENOMETHIONINE A - 75
1ghe_A_621ghe   A     MSESELENOMETHIONINE S - 76
1ghe_A_621ghe   A     MSESELENOMETHIONINE A - 77
1ghe_A_621ghe   A     MSESELENOMETHIONINE Q - 78
1jz7_A_2541jz7   A     MGMAGNESIUM ION T - 257
1jz7_A_2541jz7   A     DMSDIMETHYL SULFOXIDE T - 257
1jz7_A_2541jz7   A     MGMAGNESIUM ION Q - 266
1jz7_A_2541jz7   A     DMSDIMETHYL SULFOXIDE S - 269
1jz7_A_2541jz7   A     DMSDIMETHYL SULFOXIDE G - 270
1jz7_A_2541jz7   A     DMSDIMETHYL SULFOXIDE T - 271
1jz7_A_2541jz7   A     DMSDIMETHYL SULFOXIDE A - 272
1jz7_A_2541jz7   A     DMSDIMETHYL SULFOXIDE P - 273
1k5n_A_211k5n   A     GOLGLYCEROL Y - 27
1k5n_A_211k5n   A     GOLGLYCEROL D - 29
1k5n_A_211k5n   A     GOLGLYCEROL D - 30
1k5n_A_211k5n   A     GOLGLYCEROL T - 31
1ldn_A_1981ldn   A     FBPFRUCTOSE-1,6-DIPHOSPHATE G - 207
1ldn_A_1981ldn   A     FBPFRUCTOSE-1,6-DIPHOSPHATE V - 208
1oey_J_2381oey   J     MSESELENOMETHIONINE N - 238
1zxq_*_1211zxq   *     NAGN-ACETYL-D-GLUCOSAMINE N - 129
1zxq_*_1211zxq   *     NAGN-ACETYL-D-GLUCOSAMINE E - 130
1zxq_*_1211zxq   *     NAGN-ACETYL-D-GLUCOSAMINE T - 131

Clusters included in this Subclass
CLUSTER: HA.1.14
CLUSTER: HA.3.68