Information on SUBCLASS 2.3.14 |
Subclass Accession number: 6115
Subclass: 2.3.14 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 11.4 +/- 11.6 Average RMSD (Å) : 0.500 +/- 0.183 Consensus geometry
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Consensus Sequence: | XXGpXX |
(φψ)-conformation: | bbeabb |
Pattern: | [aikt] | [afgik] | x | x | [EG] | [ADNQS] | [erstw] | x | x | x |
Conservation: | -0.186 | -0.519 | -0.581 | -0.466 | 2.652 | 0.654 | -0.357 | -0.308 | -0.272 | -0.618 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hpg_A_198 | 1hpg | A | 198 | 207 | AHFAGSVALG | EEEETTEEEE | xxbbeabxab |
1ivw_A_254 | 1ivw | A | 261 | 270 | AFRDGDRLRP | EEEETTEEEE | bbxxeaxxxx |
1jvn_A_167 | 1jvn | A | 170 | 179 | KAKYGSEEFI | EEEETTEEEE | xbbbeaxxbx |
1kmo_A_436 | 1kmo | A | 454 | 463 | KIDIGNWTIT | EEEETTEEEE | xbxbeaxbbb |
1nr0_A_471 | 1nr0 | A | 475 | 484 | YKLSGASVSE | EEEETTEEEE | bxbbeabbbx |
1p30_A_182 | 1p30 | A | 185 | 194 | IGVEGQTPKY | EEEETTEEEE | aebxeaxwbx |
1vca_A_68 | 1vca | A | 72 | 81 | TATCESRKLE | EEEETTEEEE | bbbbeaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ivw_A_254 | 1ivw | A | TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE | V - 282 |
1ivw_A_254 | 1ivw | A | CUCOPPER (II) ION | V - 282 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | E - 445 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | H - 447 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | W - 449 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | L - 451 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | D - 452 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | D - 453 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | N - 459 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | W - 460 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | P - 464 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | G - 465 |
1kmo_A_436 | 1kmo | A | LDALAURYL DIMETHYLAMINE-N-OXIDE | M - 466 |
Clusters included in this Subclass |
CLUSTER: HA.1.52 |
CLUSTER: HA.2.72 |