Information on SUBCLASS 3.3.11 |
Subclass Accession number: 6183
Subclass: 3.3.11 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 12.5 +/- 0.0 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | hppppph |
(φψ)-conformation: | bbaaabb |
Pattern: | [F] | [QR] | [L] | x | [EQ] | [VY] | [NQ] | [KY] | [DS] | [DS] | [RY] | [IV] | x | [LY] | [HK] | [AL] |
Conservation: | 2.716 | 0.279 | 1.091 | -1.142 | 0.685 | -0.330 | 0.076 | -0.533 | -0.127 | -0.127 | -0.533 | 0.685 | -1.548 | -0.330 | 0.076 | -0.939 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dpe_*_185 | 1dpe | - | 185 | 200 | FQLQQYQKDSRIRYKA | EEEEEEETTTEEEEEE | bbxabbbaaabbbbbp |
1gm6_A_90 | 1gm6 | A | 93 | 108 | FRLLEVNYSDYVILHL | EEEEEEETTTEEEEEE | bbxabbbaaabbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gm6_A_90 | 1gm6 | A | GOLGLYCEROL | N - 91 |
1gm6_A_90 | 1gm6 | A | GOLGLYCEROL | F - 93 |
1gm6_A_90 | 1gm6 | A | GOLGLYCEROL | L - 106 |
1gm6_A_90 | 1gm6 | A | GOLGLYCEROL | L - 108 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gm6_A_90 | 1gm6 | A | CAVODOUR-BINDING CAVITY | F - 93 |
1gm6_A_90 | 1gm6 | A | CAVODOUR-BINDING CAVITY | L - 106 |
1gm6_A_90 | 1gm6 | A | CAVODOUR-BINDING CAVITY | L - 108 |
Clusters included in this Subclass |
CLUSTER: HA.2.151 |