Information on SUBCLASS 4.4.2 |
Subclass Accession number: 6278
Subclass: 4.4.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 25 Average sequence ID (%) : 8.5 +/- 12.2 Average RMSD (Å) : 1.144 +/- 0.290 Consensus geometry
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Consensus Sequence: | pXXpXXXh |
(φψ)-conformation: | bbaababb |
Pattern: | x | x | [hknqrsty] | x | x | [adegknrst] | x | [dehknpqst] | x | x | x | x |
Conservation: | -1.000 | 1.138 | 1.623 | 0.056 | -1.456 | 0.519 | -0.922 | 0.991 | -0.951 | -0.452 | -0.814 | 0.267 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1abr_B_229 | 1abr | B | 229 | 239 | .IYSLYDDMVMD | .EEETTTTEEEE | .bxbaaxabbxb |
1b63_A_107 | 1b63 | A | 111 | 122 | TSRTAEQQEAWQ | EEE-TT-SSEEE | bbbxaabaxbbb |
1eej_A_52 | 1eej | A | 52 | 61 | ..YDVSGTAPVN | ..EE-SSSS-EE | ..bbaababxbx |
1eje_A_113 | 1eje | A | 113 | 124 | WTSSRRVKPPRI | EE--SSSSS-EE | bbxxaabapxbx |
1fgu_A_330 | 1fgu | A | 331 | 342 | KITVRSNNREVA | EEE-SSSS-EEE | xxbxaabaxbbx |
1fwx_A_412 | 1fwx | A | 415 | 426 | QLIDISGDKMVL | EEEE-SSSS-EE | xxbxaababxbx |
1h0h_B_126 | 1h0h | B | 126 | 135 | .RKVAESNQMA. | .EE-TTSS-EE. | .bxxaabaxbb. |
1h5z_A_428 | 1h5z | A | 428 | 437 | ..NDHSKMVVQL | ..EE-SSSS-EE | ..xbaabaxxbx |
1j0p_A_9 | 1j0p | A | 9 | 19 | .LKMDKTKQPVV | .EEE-SSSS-EE | .xxxaababxbx |
1j71_A_278 | 1j71 | A | 278 | 289 | ILKDSDSSICYF | EEE-SSSS-EEE | bbbxaaxaxbbx |
1juv_A_105 | 1juv | A | 106 | 117 | QVSSPNAPFETM | EEE-TTSS-EEE | bbbpaabapbbx |
1kcu_L_85 | 1kcu | L | 87 | 98 | HCGQSYSYPLTF | EEEE-SSSS-EE | bbbbaabappbb |
1m6o_A_257 | 1m6o | A | 260 | 271 | HVQHEGLPKPLT | EEE-TTSSS-EE | bbbbaaxwbpxb |
1mda_H_269 | 1mda | H | 269 | 280 | VAKLKNTDGIMI | EEEETTTTEEEE | bbbxaababbxb |
1mda_L_57 | 1mda | L | 60 | 71 | SCYNPPDPNKYI | EEE-SSS--EEE | xxxxaaxabxbx |
1olz_A_271 | 1olz | A | 277 | 288 | VLRSPGLKVPVF | EE--TT-SS-EE | bxbbaababxbx |
1q44_A_29 | 1q44 | A | 29 | 40 | KEKGWLVSEIYE | EEE-SSSSEEEE | bbxxaababbbx |
1q52_A_37 | 1q52 | A | 39 | 50 | YHRHVDDATVRV | EEEESSSSEEEE | bbbxaaxabbbb |
1qdl_B_159 | 1qdl | B | 161 | 172 | AIHHEEYPIYGV | EEEESSSSEEEE | bbbxaaxabbbb |
1qni_A_412 | 1qni | A | 415 | 426 | QLIDISGEEMKL | EEEE-SSSS-EE | bxbxaababxbx |
1s7j_A_175 | 1s7j | A | 178 | 189 | TASGDSVDFVSR | EEE-SSSSEEEE | bexxaababbbb |
1tn3_*_49 | 1tn3 | - | 50 | 61 | CLKGTKVHMKCF | EEE-SSSSEEEE | bbxxaaxabbbb |
2cth_A_9 | 2cth | A | 9 | 19 | .LKMEATKQPVV | .EEE-SSSS-EE | .xbxaababxbx |
2viu_A_24 | 2viu | A | 25 | 36 | LVKTITDDQIEV | EE--SS-S-EEE | xbxbaababbxb |
3lkf_A_32 | 3lkf | A | 40 | 51 | FIKDKSYDKDTL | EEEETTSSSEEE | xbxbaababxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0h_B_126 | 1h0h | B | AC7EPE BINDING SITE FOR CHAIN A | R - 126 |
Clusters included in this Subclass |
CLUSTER: HA.4.182 |
CLUSTER: HA.5.41 |
CLUSTER: HA.6.87 |
CLUSTER: HA.7.22 |
CLUSTER: HA.7.62 |