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Information on SUBCLASS 4.7.1
Subclass Accession number: 6283
Subclass: 4.7.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 18.3 +/- 20.0
Average RMSD (Å) : 0.340 +/- 0.173

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhGXXXXX
(φψ)-conformation: bbeaalpb
Pattern: xx[fgilvy][FG]xx[egknq]xxx
Conservation:-1.000-0.387-0.3322.420-0.466-0.4220.151-0.519-0.444-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
153l_*_90153l   -9097.GFGLMQVD..EETTTTEE..xbeaalxx.
1b63_A_1201b63   A124133YAEGRDMNVTEEETTTTEEEbbbeaalxbb
1b9o_A_481b9o   A4856TEYGLFQIS.EEETTTTEE.bbbeaalxx.
1chk_A_441chk   A4452YTGGIIGFC.EEETTTTEE.xbbeaavxb.
1ejf_A_351ejf   A4049CLGGSDNFKHEEETTTTEEEbbbeaavxxb
1ekf_A_2241ekf   A227236WLYGPDHQLTEEETTTTEEExbbeaalxxa
1f6w_A_161f6w   A1827KKLGLLGDSVEE-SSSS-EEbpbeaagxbb
1fmj_A_351fmj   A3645VKLGPKGYMVEEETTTTEEEbxbeaavxxb
1gu6_A_2171gu6   A217226YFDGKNKAVKEEETTTTEEEbxbeaalxxb
1hhl_*_511hhl   -5159TDYGVLQIN.EEETTTTEE.bbbeaalxx.
1jsf_*_511jsf   -5260TDYGIFQIN.EEETTTTEE.bbbeaalxx.
1k8w_A_2801k8w   A283292VTEGENGKFIEEETTTTEEEbbbeaalxxa
1miq_A_211miq   A2128.EVGDNHQK..EETTTTEE..bbeaavxx.
1qgi_A_601qgi   A6067.TIGLFGAT..EETTTTEE..xbeaavxb.
1qqy_A_531qqy   A5360.DYGIFQLN..EETTTTEE..bbeaalxx.
1ri6_A_3001ri6   A305314EIVGEQGLLHEEETTTTEEExxbeaavxbb
1uhv_A_1131uhv   A113120.TVFYWEGN..EETTTTEE..bbeaalxp.
2eql_*_522eql   -5260SDYGLFQLN.EEETTTTEE.bxbeaalxx.
2mcm_*_712mcm   -7483AVVGADGTPWEEETTTTEEExbbeaavxwa
3lzt_*_513lzt   -5159TDYGILQIN.EEETTTTEE.bbbeaalxx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ekf_A_2241ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 237
1gu6_A_2171gu6   A     CACALCIUM ION Y - 217
1gu6_A_2171gu6   A     CACALCIUM ION F - 218
1gu6_A_2171gu6   A     HECHEME C F - 218
1gu6_A_2171gu6   A     CACALCIUM ION V - 225
1gu6_A_2171gu6   A     HECHEME C V - 225
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE T - 60
1qgi_A_601qgi   A     NAGN-ACETYL-D-GLUCOSAMINE T - 60
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE F - 64
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE G - 65
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE A - 66
1qgi_A_601qgi   A     GCSD-GLUCOSAMINE T - 67
1uhv_A_1131uhv   A     DFX1,2-DEOXY-2-FLUORO-XYLOPYRANOSE F - 115
2mcm_*_712mcm   *     CACALCIUM ION W - 83
3lzt_*_513lzt   *     ACTACETATE ION D - 52
3lzt_*_513lzt   *     ACTACETATE ION L - 56
3lzt_*_513lzt   *     ACTACETATE ION Q - 57
3lzt_*_513lzt   *     ACTACETATE ION I - 58
3lzt_*_513lzt   *     ACTACETATE ION N - 59
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gu6_A_2171gu6   A HA1HEC BINDING SITE FOR CHAIN AF - 218

Clusters included in this Subclass
CLUSTER: HA.4.40
CLUSTER: HA.5.105
CLUSTER: HA.5.39