Information on SUBCLASS 4.7.2 |
Subclass Accession number: 6284
Subclass: 4.7.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 32.5 +/- 26.3 Average RMSD (Å) : 0.350 +/- 0.173 Consensus geometry
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Consensus Sequence: | XVGpppXX |
(φψ)-conformation: | bbeaalpp |
Pattern: | [AFY] | [AVY] | [AGI] | [DQ] | [AFI] | x | [V] | [G] | [DES] | [HN] | [NQR] | [AQ] | [KPQ] | x | [NST] | [FV] | x | [ILV] | x |
Conservation: | -0.139 | -0.794 | -1.071 | 0.757 | -0.816 | -1.038 | 1.350 | 2.764 | -0.071 | 1.332 | -0.005 | 0.049 | -0.278 | -1.259 | 0.049 | -0.037 | -0.634 | 0.451 | -0.610 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eag_A_14 | 1eag | A | 14 | 32 | YAADITVGSNNQKLNVIVD | EEEEEEETTTTEEEEEEEE | bbbxbbbeaalxxbbbxxb |
1j71_A_14 | 1j71 | A | 14 | 32 | YAADIVVGSNQQKQTVVID | EEEEEEETTTTEEEEEEEE | bbbxbbbeaalxxbbbxxb |
1lf2_A_15 | 1lf2 | A | 16 | 34 | FYGDAEVGDNQQPFTFILD | EEEEEEETTTTEEEEEEEE | bbbxbbbeaalxwbbbxxb |
1oa8_A_627 | 1oa8 | A | 628 | 646 | AVIQFAVGEHRAQVSVEVL | EEEEEEETTTTEEEEEEEE | bbbxbbxeaalxxbbbxbp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1eag_A_14 | 1eag | A | CATCATALYTIC SITE | D - 32 |
Clusters included in this Subclass |
CLUSTER: HA.3.178 |