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Information on SUBCLASS 5.1.7
Subclass Accession number: 6346
Subclass: 5.1.7 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 18.5 +/- 18.6
Average RMSD (Å) : 0.607 +/- 0.133

Consensus geometry
d (Å): 3 delta (°): 135-180 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXpXpGpXX
(φψ)-conformation: bbpaagppb
Pattern: xxx[ADGNST]x[DENQRS][GKN][knry]x[afilmtv]x
Conservation:-0.833-0.933-0.5840.563-0.4830.7692.3420.668-0.387-0.214-0.909
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1arb_*_1971arb   -197207PIYSPEKRVLGEEE-TTS-EEExbbxaavbxae
1dtd_A_3891dtd   A394404IGSSFENRPMNEEE-TT--EEEaebxaavxxxb
1e6y_B_22791e6y   B22822292DKTAPSGYNFYEEE-TTS-EEEabbxaavxxxx
1e9i_A_91e9i   A1020EIIDSRGNPTVEEE-TTS-EEEbbbxaavbwbx
1ep5_A_2291ep5   A229239PILDNQGRVVAEEE-TTS-EEExbbxaavxxab
1f89_A_1091f89   A114124IIFNEDGKLIDEEE-TTS-EEExbbbaagxxab
1io1_A_3041io1   A310320SYTDNNGKTIDEEE-TTS-EEEbbbxaavxbbx
1itw_A_3621itw   A362372KMWGPDGKLHDEEE-TTSSEEEbbxbaavbxbx
1k8w_A_2901k8w   A295305GEIDDEGRVAPEEE-TTS-EEEbbxxaavbpxw
1m4l_A_331m4l   A3848IGRSYEGRPIYEEE-TTS-EEEaebxaavxxbb
1o1z_A_311o1z   A3646VRLSKDGKVVVEEE-TTS-EEEbbbxaavxxbx
1obr_*_301obr   -3545IGKSYEGRELWEEE-TTS-EEEaebxaavxxxx
1r18_A_1951r18   A200210YDKDANGKVEMEEE-TTS-EEEbbbxaavxbbb
2por_*_192por   -3242SGTTDSGLEFGEEE-TT--EEEbbbxaavxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ep5_A_2291ep5   A     UREUREA R - 236
1obr_*_301obr   *     CACALCIUM ION K - 48
2por_*_192por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL W - 19
2por_*_192por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL N - 20
2por_*_192por   *     OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL F - 21

Clusters included in this Subclass
CLUSTER: HA.4.78
CLUSTER: HA.6.31