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Information on SUBCLASS 5.4.6
Subclass Accession number: 6367
Subclass: 5.4.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005102 (>50 %)  GO:0005125 (>50 %)  GO:0008083 (>50 %)  
SCOP : 57500 (>50 %)  57501 (>50 %)  57507 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 31.5 +/- 21.6
Average RMSD (Å) : 0.467 +/- 0.231

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hhcppXXXh
(φψ)-conformation: bbpaalppb
Pattern: x[NST][A][IL][S][MV][LV][MY][FLW][DN][DE][KNS][EGS]x[TV][IV][KL][KY]
Conservation:-1.168-0.3571.4650.5351.4650.2690.0690.318-0.3571.0681.226-0.571-1.214-1.858-0.2371.023-1.168-0.509
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ep5_A_2501ep5   A250267RTALSVVMWNEKGVTVKYEEEEEEEEE-TT--EEEEbbxbxbbbbxaavxxbbb
1lxi_A_1041lxi   A109126LNAISVLYFDDSSNVILKEEEEEEEEE-TTS-EEEEbbxbbbObbxaavxxbbb
1rew_A_791rew   A84101LSAISMLYLDENEKVVLKEEEEEEEEE-TTS-EEEEbbxbxbbbbxaavbxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ep5_A_2501ep5   A     UREUREA W - 258
1ep5_A_2501ep5   A     UREUREA N - 259
1ep5_A_2501ep5   A     UREUREA E - 260
1ep5_A_2501ep5   A     UREUREA T - 264
1lxi_A_1041lxi   A     NAGN-ACETYL-D-GLUCOSAMINE T - 107
1lxi_A_1041lxi   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 108
1lxi_A_1041lxi   A     NAGN-ACETYL-D-GLUCOSAMINE R - 134
1lxi_A_1041lxi   A     NAGN-ACETYL-D-GLUCOSAMINE A - 135
1lxi_A_1041lxi   A     NAGN-ACETYL-D-GLUCOSAMINE C - 136
1lxi_A_1041lxi   A     NAGN-ACETYL-D-GLUCOSAMINE G - 137

Clusters included in this Subclass
CLUSTER: HA.6.60