Information on SUBCLASS 4.1.17 |
Subclass Accession number: 637
Subclass: 4.1.17 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 48726 (>75 %) 48727 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 13.6 Average RMSD (Å) : 1.033 +/- 0.404 Consensus geometry
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Consensus Sequence: | XphpcXph |
(φψ)-conformation: | bbaaalbb |
Pattern: | [KTV] | x | [KV] | [KS] | x | [QWY] | x | x | [DR] | [LPW] | [EKS] | [DN] | x | [EK] | [LV] |
Conservation: | -0.664 | -1.379 | -0.184 | 0.660 | -0.460 | 0.663 | -0.971 | -0.664 | 0.564 | -1.073 | 0.153 | 1.936 | -0.971 | 1.437 | 0.952 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1my7_A_266 | 1my7 | A | 266 | 280 | VRVSMQLRRPSDREL | EEEEEEEEETTTTEE | bxbbbbxbbaaalxb |
1pz4_A_39 | 1pz4 | A | 39 | 53 | KVVKNWVMDLKNVKL | EEEEEEEEETTTTEE | xxabbbbbxaaavbb |
3lkf_A_261 | 3lkf | A | 273 | 287 | TFKSTYEIDWENHKV | EEEEEEEEETTTTEE | bbbbbbbxbaaalbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pz4_A_39 | 1pz4 | A | PLMPALMITIC ACID | M - 46 |
1pz4_A_39 | 1pz4 | A | PLMPALMITIC ACID | L - 48 |
Clusters included in this Subclass |
CLUSTER: HA.3.153 |