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Information on 1my7
PDB: 1my7
Compound: nf-kappab p65 (rela) subunit
Classification: TRANSCRIPTION
Entry date in PDB: 2002-12-04
Resolution [Å]: 1.49
R-Factor: 0.233


CHAIN: A
SWISS-PROT/TREMBL: Q04207
   KEYWORD: 3D-structure    Activator    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Transcription regulation   
SCOP: b.1.18.1 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain    p65 subunit of NF-kappa B (NFKB), dimerization domain    Human (Homo sapiens)
GO:  nucleus    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent   


CHAIN: B
SWISS-PROT/TREMBL: Q04207
   KEYWORD: 3D-structure    Activator    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Transcription regulation   
SCOP: b.1.18.1 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain    p65 subunit of NF-kappa B (NFKB), dimerization domain    Human (Homo sapiens)
GO:  nucleus    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent   
1my7 Image
Image Source: PDB

Stored Loops of 1my7

Loops in ArchDB40 clusters

1my7_A_266 - HA => SUBCLASS : 4.1.17
1my7_A_196 - AR => SUBCLASS : 3.9.2

Loops in ArchDB95 clusters

1my7_A_196 - AR => SUBCLASS : 3.4.2
1my7_A_203 - AR => SUBCLASS : 5.72.1
1my7_A_211 - AR => SUBCLASS : 7.38.1
1my7_A_249 - AR => SUBCLASS : 12.8.1
1my7_A_266 - HA => SUBCLASS : 4.1.21

Loops not clustered in ArchDB

1my7_A_233 - AR
1my7_A_279 - AR
1my7_A_225 - HA

Homologous structures to 1my7 classified in ArchDB

1bft A - percentage of sequence identity: 99
1bft B - percentage of sequence identity: 99
1gji A - percentage of sequence identity: 71
1gji B - percentage of sequence identity: 71
1ikn A - percentage of sequence identity: 99
1k3z A - percentage of sequence identity: 99
1k3z B - percentage of sequence identity: 99
1le5 A - percentage of sequence identity: 99
1le5 E - percentage of sequence identity: 99
1le9 A - percentage of sequence identity: 99
1le9 E - percentage of sequence identity: 99
1lei A - percentage of sequence identity: 99
1my5 A - percentage of sequence identity: 99
1my5 B - percentage of sequence identity: 99
1my7 A - percentage of sequence identity: 100
1my7 B - percentage of sequence identity: 100
1nfi A - percentage of sequence identity: 99
1nfi C - percentage of sequence identity: 99
1oy3 B - percentage of sequence identity: 99
1oy3 C - percentage of sequence identity: 99
1ram A - percentage of sequence identity: 99
1ram B - percentage of sequence identity: 99
1vkx A - percentage of sequence identity: 99
1zk9 A - percentage of sequence identity: 60
1zka A - percentage of sequence identity: 60
2ram A - percentage of sequence identity: 99
2ram B - percentage of sequence identity: 99