Information on SUBCLASS 5.15.1 |
Subclass Accession number: 6393
Subclass: 5.15.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 33.7 +/- 25.1 Average RMSD (Å) : 0.282 +/- 0.075 Consensus geometry
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Consensus Sequence: | pSXDXGXpW |
(φψ)-conformation: | bbaallabb |
Pattern: | [fiv] | x | [ekty] | [ST] | [adest] | [D] | x | [GY] | [adknqr] | [NQST] | [FW] | [knqrst] | x |
Conservation: | -0.481 | -0.835 | -0.399 | 0.508 | -0.680 | 1.866 | -0.479 | 0.349 | -0.736 | 0.157 | 2.170 | -0.560 | -0.880 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a2p_A_96 | 1a2p | A | 96 | 108 | IYKTTDHYQTFTK | EEEESSTTS--EE | bbbbaalvabbbx |
1eur_*_171 | 1eur | - | 174 | 186 | VATSTDGGLTWSH | EEEESSTTSS-EE | bbbbaavvabbbb |
1eur_*_234 | 1eur | - | 238 | 250 | SVYSDDHGRTWRA | EEEESSTTS--EE | xbbbaavvabbbx |
1mgr_A_82 | 1mgr | A | 82 | 94 | DYYTADHYASFRR | EEEESSTTS--EE | bbbbaalvabbbx |
1n1t_A_207 | 1n1t | A | 211 | 223 | IMYSEDDGNTWKF | EEEESSTTSS-EE | xbbbaalvabbbx |
1n1t_A_257 | 1n1t | A | 257 | 269 | VYESSDMGKTWVE | EEEESSTTSS-EE | bbbbaalvabbbx |
1n1t_A_67 | 1n1t | A | 71 | 83 | VKYSVDDGATWNT | EEEESSTTSS-EE | bbbbaalvabbbb |
1qba_*_841 | 1qba | - | 842 | 854 | IEYSTDGGKQWQR | EEEESSSSSS-EE | bbbbaavvabbbx |
1sox_A_379 | 1sox | A | 382 | 394 | VDVSLDGGRTWKV | EEEESBTTSS-EE | bbbbaavvabbbx |
2rbi_A_95 | 2rbi | A | 95 | 107 | IYKTTDNYATFTR | EEEESSTTS-EEE | bbbbaalvabbbx |
2sli_*_568 | 2sli | - | 570 | 582 | FMYSDDHGDNWTY | EEEESSTTSS-EE | bbbbaalvabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mgr_A_82 | 1mgr | A | SULSULFATE ANION | H - 88 |
1mgr_A_82 | 1mgr | A | SULSULFATE ANION | Y - 89 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2rbi_A_95 | 2rbi | A | 2MUTATED CATALYTIC SITE RESIDUE. | N - 101 |
Clusters included in this Subclass |
CLUSTER: HA.6.40 |