Information on SUBCLASS 4.2.5 |
Subclass Accession number: 645
Subclass: 4.2.5 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0000287 (>50 %) GO:0003676 (>50 %) GO:0003677 (>50 %) GO:0003677 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 10.8 +/- 12.6 Average RMSD (Å) : 0.571 +/- 0.198 Consensus geometry
|
Consensus Sequence: | XXXXXXXX |
(φψ)-conformation: | bbaagpbb |
Pattern: | [afgik] | [ILTVY] | x | [clt] | x | x | [GKQR] | [anrs] | x | x | x |
Conservation: | -1.452 | 0.994 | -0.558 | 1.692 | -0.607 | -0.199 | 1.534 | 0.232 | -0.645 | -0.423 | -0.567 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1am2_*_44 | 1am2 | - | 60 | 70 | AVRTVEGLRVT | EEEETTS-EEE | xxbbaagxbbb |
1f3u_B_125 | 1f3u | B | 127 | 137 | FTQCPDGAFEA | EEE-TTS-EEE | bbxbaavxbbb |
1i7q_A_452 | 1i7q | A | 454 | 464 | GYFTAVRNLDT | EEEETTS-EEE | ebbbaavxbbb |
1mi8_A_47 | 1mi8 | A | 58 | 68 | ILKTRLGRTIK | EEEETT--EEE | xbbbaagxbbb |
1osp_O_109 | 1osp | O | 113 | 123 | KVTSKDKSSTE | EEEETTS-EEE | bbbxaavxbbb |
1vrt_A_456 | 1vrt | A | 456 | 466 | GYVTNRGRQKV | EEEETTS-EEE | ebbbaavxbbb |
2hlc_A_30 | 2hlc | A | 34 | 44 | DITLQDQRRVW | EEEETTS-EEE | bbbxaavxbbb |
Clusters included in this Subclass |
CLUSTER: HA.4.73 |
CLUSTER: HA.5.100 |
CLUSTER: HA.5.162 |