ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.6.1

Subclass Accession number: 6587
Subclass: 11.6.1

Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.4 (>50 %)  3.4.21 (>50 %)
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0042708 (>50 %)
SCOP : 50493 (>75 %)  50494 (>75 %)  50514 (>75 %)

Number of loops: 3

Average sequence ID (%) : 66.7 +/- -18.1
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry

d (Å): 5

delta (°): 90-135

theta (°): 90-135

rho (°): 270-315

Consensus Sequence:	FhSXhGCNXXpKPpV
(φψ)-conformation:	bbpaaeabbplbppb

Pattern:	[WY]	[AQ]	[V]	[H]	[G]	[IV]	[TV]	[S]	[F]	[GV]	[S]	[ARS]	[FL]	[G]	[C]	[N]	[TVY]	[ITY]	[HKR]	[K]	[P]	[ST]	[V]	[F]	[T]	[R]
Conservation:	0.736	-1.053	-0.108	1.684	0.788	-0.328	-0.849	-0.108	0.788	-1.479	-0.108	-1.352	-0.823	0.788	2.131	0.788	-1.401	-1.501	-0.904	0.340	1.236	-0.628	-0.108	0.788	0.340	0.340

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bru_P_207	1bru	P	207	232	WQVHGIVSFGSSLGCNYYHKPSVFTR	EEEEEEEEE-BTTBSS-TT--EEEEE	xbxabbxabbxaaeabbxvbwpbbxx
1gvk_B_206	1gvk	B	207	232	YAVHGVTSFVSRLGCNVTRKPTVFTR	EEEEEEEEE-BTTBSS-TT--EEEEE	xbxabbpabbxaaeaxbxvbpxbbxx
1pyt_C_607	1pyt	C	607	632	WQVHGVTSFVSAFGCNTIKKPTVFTR	EEEEEEEEE-BTTBSS-TT--EEEEE	bbxabbpabbxaaeabbxvbxpxbxx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bru_P_207	1bru	P	1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL	V - 213
1bru_P_207	1bru	P	1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL	S - 214
1bru_P_207	1bru	P	1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL	F - 215
1bru_P_207	1bru	P	1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL	G - 216

Clusters included in this Subclass