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Information on SUBCLASS 13.3.1
Subclass Accession number: 6602
Subclass: 13.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005507 (>75 %)  GO:0008471 (>75 %)  GO:0016679 (>75 %)  GO:0016682 (>75 %)  GO:0046914 (>75 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 71.7 +/- -27.0
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 135-180 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: VRSAGSpXYNhXcPhXR
(φψ)-conformation: abpplbapbbaaawpbb
Pattern: [F][AS][V][V][R][S][A][G][S][ST][TV][Y][N][FY][DNV][DN][P][IV][FK][R]
Conservation:1.052-0.962-0.101-0.1010.475-0.101-0.1011.052-0.101-0.796-1.0361.6291.0520.357-2.024-0.3561.629-0.388-1.6540.475
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gyc_A_4041gyc   A404423FAVVRSAGSTTYNYNDPIFREEEEE-TT-----SSS--EEbxxabxxvbaxbbaaawxbb
1hfu_A_4051hfu   A405424FSVVRSAGSSTYNFVNPVKREEEEE-TT------SSB-EEbxxabxxvbabbbaaawxbb
1kya_A_4041kya   A404423FAVVRSAGSTVYNYDNPIFREEEEE-TT-----SSS--EEbxxabxxvbaxbxaaaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gyc_A_4041gyc   A     NAGN-ACETYL-D-GLUCOSAMINE R - 408
1gyc_A_4041gyc   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 415

Clusters included in this Subclass
CLUSTER: HA.12.15