Information on SUBCLASS 4.8.2 |
Subclass Accession number: 661
Subclass: 4.8.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) GO : GO:0016788 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 17.6 +/- 16.2 Average RMSD (Å) : 0.900 +/- 0.141 Consensus geometry
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Consensus Sequence: | hXGXchph |
(φψ)-conformation: | bbeaalpb |
Pattern: | x | x | x | x | [AITV] | x | [G] | [AER] | [DNQ] | [GM] | x | [FLPV] | x | x | [KMT] | [GPV] | [AENR] |
Conservation: | -0.533 | -0.488 | -0.427 | -0.648 | 0.014 | 0.073 | 3.414 | 0.117 | 0.876 | 0.764 | -0.560 | -0.692 | -0.737 | -0.484 | 0.039 | -0.433 | -0.295 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b63_A_120 | 1b63 | A | 121 | 137 | WQAYAEGRDMNVTVKPA | EEEEEETTTTEEEEEEE | bbbbbbeaalxbbbbwb |
1k8w_A_280 | 1k8w | A | 280 | 296 | LVRVTEGENGKFIGMGE | EEEEEETTTTEEEEEEE | xbxbbbeaalxxaexbb |
1ri6_A_300 | 1ri6 | A | 302 | 318 | SVYEIVGEQGLLHEKGR | EEEEEETTTTEEEEEEE | bbbxxbeaavxbbpabb |
2mcm_*_71 | 2mcm | - | 71 | 87 | SFQAVVGADGTPWGTVN | EEEEEETTTTEEEEEEE | bbxxbbeaavxwaexbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2mcm_*_71 | 2mcm | * | CACALCIUM ION | W - 83 |
Clusters included in this Subclass |
CLUSTER: HA.5.69 |