Information on SUBCLASS 4.10.1 |
Subclass Accession number: 666
Subclass: 4.10.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 7.6 +/- 9.6 Average RMSD (Å) : 0.620 +/- 0.175 Consensus geometry
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Consensus Sequence: | XXpXXXXh |
(φψ)-conformation: | bpaabpbb |
Pattern: | x | x | [adgnrst] | [chkrsty] | x | x | [gnpt] | x | [AFILY] | x |
Conservation: | -1.030 | -1.015 | 0.023 | -0.420 | -0.740 | -0.475 | 0.525 | 0.455 | 2.311 | 0.366 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_B_1837 | 1a9x | B | 1840 | 1849 | IHRTDKPAFS | EEESSSSEEE | bbxaabxbbb |
1e1a_A_73 | 1e1a | A | 77 | 86 | QCDRDANQLF | EE-SSSSEEE | bxxaabxbbx |
1gzq_A_35 | 1gzq | A | 39 | 48 | GWDSDSGTAI | EEETTTTEEE | bbxaaxpbxb |
1hnf_*_110 | 1hnf | - | 112 | 121 | SWTCINTTLT | EEETTTTEEE | bbbaabxbbb |
1k32_A_523 | 1k32 | A | 523 | 532 | SPDRVVLNFS | EE-SSSS-EE | bxxaabxbbb |
1l9x_A_202 | 1l9x | A | 207 | 216 | MEGYKYPVYG | EEESSS-EEE | bbxaaxxbbb |
1nez_G_51 | 1nez | G | 55 | 64 | YMASSHNKIT | EE-SSS--EE | bbxaabbbbb |
1qks_A_300 | 1qks | A | 304 | 313 | LASHYRPEFI | EE-SSSSEEE | bbxaabxbbb |
1scj_B_336 | 1scj | B | 339 | 348 | KQFKYVNAAA | EE-SSSSEEE | bbxaabxbbx |
1utc_A_70 | 1utc | A | 72 | 81 | IMNPASKVIA | EE-SSSSEEE | bxpaaxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzq_A_35 | 1gzq | A | AC6TWT BINDING SITE FOR CHAIN A | W - 40 |
Clusters included in this Subclass |
CLUSTER: HA.3.219 |
CLUSTER: HA.4.182 |
CLUSTER: HA.5.73 |
CLUSTER: HA.6.68 |