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Information on SUBCLASS 3.2.1
Subclass Accession number: 6690
Subclass: 3.2.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 11.8 +/- 16.9
Average RMSD (Å) : 0.661 +/- 0.278

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXXphX
(φψ)-conformation: bbabpbb
Pattern: xx[acdstv]x[aegknrst][deknprst][fgiklmtv]x
Conservation:-0.622-0.6762.1840.1320.1720.229-0.337-1.083
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1agi_*_701agi   -7178RISKSEFQEEESS-EEbbxabxbx
1aog_A_1481aog   A152159LETEHILLEEBS-EEEbxbabbbx
1b1i_A_691b1i   A7077RISKSSFQEEESS-EEbbxaxxbx
1bu7_A_3301bu7   A333340LYAKEDTVEEESS-EEbbxabpbb
1cpt_*_3181cpt   -319326RTALADTEEEESS-EEbbxabxbb
1dyt_A_711dyt   A7279HRSRFRVPEE-SS-EEbbxabxbw
1dza_A_1721dza   A173180YKSNSSMHEE-SS-EEbbxabxbx
1e0t_A_1411e0t   A144151CKVLNNGDEEE-S-EEbbxabxbx
1eyq_A_911eyq   A95102GSKIRELSEEESS-EEbbxabxbx
1g24_A_1661g24   A167174RLEYGYISEEESS-EEbbbaxxbx
1gxy_A_1221gxy   A126133RGTKTRFHEEESS-EEbxbaxxbb
1h5z_A_3241h5z   A326333RVAKGEFEEEE-S-EEbbxabbbb
1hx0_A_4611hx0   A461467.SCTGIKV.EESS-EE.bbabxbb
1izo_A_2921izo   A295302ALVKKDFVEEE-S-EEbbxabpbb
1jae_*_4361jae   -436442.SCTGKSV.EESS-EE.bxabxbb
1jfb_A_2911jfb   A292299RTAKEDVMEEESS-EEbbxabpbx
1jip_A_2911jip   A293300RFAAEEVEEEESS-EEbbxabxbb
1kf6_A_1791kf6   A183190IRANAVVMEE-S-EEEbxbabbbx
1m07_A_571m07   A6067VLSTTRFQEE-SS-EEbxpabxbx
1n1x_A_721n1x   A7380YQSKSTMREE-SS-EEbbxabxbx
1n40_A_2841n40   A286293RLATADIQEEESS-EEbbxabxbx
1ocx_A_861ocx   A8895MLDVCPIREE-SS-EEbxbabpbb
1pkl_A_1601pkl   A163170CTVTNSHTEEE-S-EEbbxabxbx
1qap_A_581qap   A5966VITREDGVEEESS-EEbbxabxbb
1qmq_A_2971qmq   A299306RILTSDYEEEESS-EEbbxabxbx
1sft_A_2691sft   A269276YTAQTEEWEE--SSEExbxabxbx
1ued_A_2981ued   A298305RLAIKDVVEEESS-EExxxabpbx
3grs_*_1453grs   -147154YTAPHILIEE-S-EEEbbbabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b1i_A_691b1i   A     CITCITRIC ACID V - 78
1bu7_A_3301bu7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 330
1bu7_A_3301bu7   A     EDO1,2-ETHANEDIOL A - 330
1bu7_A_3301bu7   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 331
1bu7_A_3301bu7   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 332
1bu7_A_3301bu7   A     EDO1,2-ETHANEDIOL Y - 334
1cpt_*_3181cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 319
1dyt_A_711dyt   A     CITCITRIC ACID R - 73
1dyt_A_711dyt   A     CITCITRIC ACID S - 74
1dyt_A_711dyt   A     CITCITRIC ACID R - 75
1dyt_A_711dyt   A     CITCITRIC ACID F - 76
1dyt_A_711dyt   A     CITCITRIC ACID R - 77
1dyt_A_711dyt   A     CITCITRIC ACID P - 79
1eyq_A_911eyq   A     NARNARINGENIN I - 93
1eyq_A_911eyq   A     NARNARINGENIN G - 95
1eyq_A_911eyq   A     SULSULFATE ANION I - 98
1eyq_A_911eyq   A     SULSULFATE ANION R - 99
1eyq_A_911eyq   A     NARNARINGENIN L - 101
1gxy_A_1221gxy   A     GOLGLYCEROL Y - 125
1gxy_A_1221gxy   A     GOLGLYCEROL R - 126
1gxy_A_1221gxy   A     GOLGLYCEROL G - 127
1gxy_A_1221gxy   A     GOLGLYCEROL T - 128
1h5z_A_3241h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 324
1h5z_A_3241h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 325
1h5z_A_3241h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 326
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL I - 465
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL K - 466
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL V - 467
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL Y - 468
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL V - 469
1izo_A_2921izo   A     PAMPALMITOLEIC ACID F - 292
1izo_A_2921izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 293
1izo_A_2921izo   A     PAMPALMITOLEIC ACID L - 293
1jfb_A_2911jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 291
1jfb_A_2911jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 292
1jfb_A_2911jfb   A     GOLGLYCEROL R - 292
1jfb_A_2911jfb   A     GOLGLYCEROL K - 295
1jip_A_2911jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 291
1jip_A_2911jip   A     KTNCIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL) PIPERAZINE T - 291
1jip_A_2911jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 292
1jip_A_2911jip   A     KTNCIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL) PIPERAZINE T - 292
1jip_A_2911jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 293
1jip_A_2911jip   A     KTNCIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL) PIPERAZINE R - 293
1jip_A_2911jip   A     KTNCIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL) PIPERAZINE F - 294
1n40_A_2841n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 284
1n40_A_2841n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 285
1n40_A_2841n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 286
1ocx_A_861ocx   A     PBMTRIMETHYL LEAD ION L - 89
1qmq_A_2971qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 297
1qmq_A_2971qmq   A     LRBLAMBDA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE) -C9-ADAMANTANE RUTHENIUM (II) D - 297
1qmq_A_2971qmq   A     DRBDELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C9-ADAMANTANE RUTHENIUM (II) D - 297
1qmq_A_2971qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 298
1qmq_A_2971qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 299
1ued_A_2981ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 298
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gxy_A_1221gxy   A GOAGOL BINDING SITE FOR CHAIN AR - 126
1gxy_A_1221gxy   A GOAGOL BINDING SITE FOR CHAIN AG - 127
1qmq_A_2971qmq   A HEMHEM BINDING SITED - 297

Clusters included in this Subclass
CLUSTER: AR.2.10
CLUSTER: AR.3.10
CLUSTER: AR.4.4