Information on SUBCLASS 5.2.1 |
Subclass Accession number: 6806
Subclass: 5.2.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 24 Average sequence ID (%) : 48.5 +/- 27.0 Average RMSD (Å) : 0.308 +/- 0.106 Consensus geometry
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Consensus Sequence: | hhDFGhApX |
(φψ)-conformation: | bblaaapbb |
Pattern: | [cilmtv] | [ckqry] | [ilv] | [acgilmtv] | [d] | [flw] | [g] | [filmw] | [astv] | [cehkrt] | x |
Conservation: | -0.243 | -0.408 | 0.382 | -0.817 | 1.731 | 0.502 | 1.731 | -0.762 | -0.084 | -0.849 | -1.185 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apm_E_180 | 1apm | E | 180 | 190 | IQVTDFGFAKR | EEE---TT-EE | xbxbvaaaxbb |
1b6c_B_347 | 1b6c | B | 347 | 357 | CCIADLGLAVR | EEE---TT-EE | bbxblaaaxbb |
1cki_A_150 | 1cki | A | 150 | 160 | VYIIDFGLAKK | EEE---SS-EE | xbbbvaaapbx |
1cm8_A_167 | 1cm8 | A | 167 | 177 | LKILDFGLARQ | EEE---TT-EE | bbxblaaaxbx |
1csn_*_150 | 1csn | - | 150 | 160 | IYVVDFGMVKF | EEE---TT-EE | xbbbvaaaxbx |
1fot_A_224 | 1fot | A | 224 | 234 | IKITDFGFAKY | EEE---SS-EE | xbxblaaaxbx |
1gjo_A_640 | 1gjo | A | 640 | 650 | MKIADFGLARD | EEE---SS-EE | xbxblaaaxbx |
1h1w_A_219 | 1h1w | A | 219 | 229 | IQITDFGTAKV | EEE---TT-EE | xbxbvaaaxbx |
1h26_C_141 | 1h26 | C | 141 | 151 | IKLADFGLARA | EEE---TT-EE | bbxblaaaxbx |
1h4l_A_140 | 1h4l | A | 140 | 150 | LKLADFGLARA | EEE--GGG-EE | bbxblaaaxbx |
1ia8_A_144 | 1ia8 | A | 144 | 154 | LKISDFGLATV | EEE---TT-EE | xbxbvaaaxbx |
1ir3_A_1146 | 1ir3 | A | 1146 | 1156 | VKIGDFGMTRD | EEE---TT-EE | xbxblaaaxbx |
1j1b_A_195 | 1j1b | A | 196 | 206 | LKLCDFGSAKQ | EEE---TT-EE | bbxbvaaaxbx |
1jks_A_157 | 1jks | A | 157 | 167 | IKIIDFGLAHK | EEE---TT-EE | bbxblaaaxbx |
1m14_A_826 | 1m14 | A | 827 | 837 | VKITDFGLAKL | EEE---TT-EE | bbxblaaapbx |
1m2r_A_170 | 1m2r | A | 171 | 181 | LRLIDWGLAEF | EEE---TT-EE | bbxblaaaxbx |
1mq4_A_270 | 1mq4 | A | 270 | 280 | LKIADFGWSVH | EEE--GGG-EE | xbxbvaaaxbx |
1na7_A_170 | 1na7 | A | 171 | 181 | LRLIDWGLAEF | EEE---SS-EE | bbxblaaapbx |
1o6y_A_152 | 1o6y | A | 152 | 162 | VKVMDFGIARA | EEE---TT-EE | xbxbvaaapbx |
1phk_*_163 | 1phk | - | 163 | 173 | IKLTDFGFSCQ | EEE---TT-EE | xbxblaaaxbx |
1pkg_A_806 | 1pkg | A | 806 | 816 | TKICDFGLARD | EEE---SS-EE | bbxblaaaxbx |
1pme_*_163 | 1pme | - | 163 | 173 | LKICDFGLARV | EEE---TT-EE | bbxbvaaaxbx |
1q8y_A_543 | 1q8y | A | 546 | 556 | IKIADLGNACW | EEE---TT-EE | bbxblaaaxbx |
1qpc_A_378 | 1qpc | A | 378 | 388 | CKIADFGLARL | EEE---TT-EE | bbxblaaaxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h1w_A_219 | 1h1w | A | BC2SO4 BINDING SITE FOR CHAIN A | Q - 220 |
1h1w_A_219 | 1h1w | A | AC1SEP BINDING SITE FOR CHAIN A | K - 228 |
1o6y_A_152 | 1o6y | A | MG1MG BINDING SITE FOR CHAIN A | D - 156 |
Clusters included in this Subclass |
CLUSTER: AR.5.1 |