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Information on SUBCLASS 5.2.1
Subclass Accession number: 6806
Subclass: 5.2.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 24

Average sequence ID (%) : 48.5 +/- 27.0
Average RMSD (Å) : 0.308 +/- 0.106

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: hhDFGhApX
(φψ)-conformation: bblaaapbb
Pattern: [cilmtv][ckqry][ilv][acgilmtv][d][flw][g][filmw][astv][cehkrt]x
Conservation:-0.243-0.4080.382-0.8171.7310.5021.731-0.762-0.084-0.849-1.185
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1apm_E_1801apm   E180190IQVTDFGFAKREEE---TT-EExbxbvaaaxbb
1b6c_B_3471b6c   B347357CCIADLGLAVREEE---TT-EEbbxblaaaxbb
1cki_A_1501cki   A150160VYIIDFGLAKKEEE---SS-EExbbbvaaapbx
1cm8_A_1671cm8   A167177LKILDFGLARQEEE---TT-EEbbxblaaaxbx
1csn_*_1501csn   -150160IYVVDFGMVKFEEE---TT-EExbbbvaaaxbx
1fot_A_2241fot   A224234IKITDFGFAKYEEE---SS-EExbxblaaaxbx
1gjo_A_6401gjo   A640650MKIADFGLARDEEE---SS-EExbxblaaaxbx
1h1w_A_2191h1w   A219229IQITDFGTAKVEEE---TT-EExbxbvaaaxbx
1h26_C_1411h26   C141151IKLADFGLARAEEE---TT-EEbbxblaaaxbx
1h4l_A_1401h4l   A140150LKLADFGLARAEEE--GGG-EEbbxblaaaxbx
1ia8_A_1441ia8   A144154LKISDFGLATVEEE---TT-EExbxbvaaaxbx
1ir3_A_11461ir3   A11461156VKIGDFGMTRDEEE---TT-EExbxblaaaxbx
1j1b_A_1951j1b   A196206LKLCDFGSAKQEEE---TT-EEbbxbvaaaxbx
1jks_A_1571jks   A157167IKIIDFGLAHKEEE---TT-EEbbxblaaaxbx
1m14_A_8261m14   A827837VKITDFGLAKLEEE---TT-EEbbxblaaapbx
1m2r_A_1701m2r   A171181LRLIDWGLAEFEEE---TT-EEbbxblaaaxbx
1mq4_A_2701mq4   A270280LKIADFGWSVHEEE--GGG-EExbxbvaaaxbx
1na7_A_1701na7   A171181LRLIDWGLAEFEEE---SS-EEbbxblaaapbx
1o6y_A_1521o6y   A152162VKVMDFGIARAEEE---TT-EExbxbvaaapbx
1phk_*_1631phk   -163173IKLTDFGFSCQEEE---TT-EExbxblaaaxbx
1pkg_A_8061pkg   A806816TKICDFGLARDEEE---SS-EEbbxblaaaxbx
1pme_*_1631pme   -163173LKICDFGLARVEEE---TT-EEbbxbvaaaxbx
1q8y_A_5431q8y   A546556IKIADLGNACWEEE---TT-EEbbxblaaaxbx
1qpc_A_3781qpc   A378388CKIADFGLARLEEE---TT-EEbbxblaaaxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1apm_E_1801apm   E     PHOPHEOPHYTIN A F - 187
1apm_E_1801apm   E     PHOPHEOPHYTIN A K - 189
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 170
1cm8_A_1671cm8   A     MGMAGNESIUM ION D - 171
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 171
1cm8_A_1671cm8   A     MGMAGNESIUM ION F - 172
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER F - 172
1cm8_A_1671cm8   A     MGMAGNESIUM ION G - 173
1cm8_A_1671cm8   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 173
1cm8_A_1671cm8   A     TPOPHOSPHOTHREONINE L - 174
1cm8_A_1671cm8   A     PTRO-PHOSPHOTYROSINE L - 174
1cm8_A_1671cm8   A     MGMAGNESIUM ION L - 174
1cm8_A_1671cm8   A     TPOPHOSPHOTHREONINE A - 175
1cm8_A_1671cm8   A     TPOPHOSPHOTHREONINE R - 176
1csn_*_1501csn   *     ATPADENOSINE-5'-TRIPHOSPHATE V - 153
1csn_*_1501csn   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 154
1csn_*_1501csn   *     MGMAGNESIUM ION D - 154
1fot_A_2241fot   A     TPOPHOSPHOTHREONINE K - 233
1h1w_A_2191h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 222
1h1w_A_2191h1w   A     GOLGLYCEROL D - 223
1h1w_A_2191h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE D - 223
1h1w_A_2191h1w   A     GOLGLYCEROL F - 224
1h1w_A_2191h1w   A     GOLGLYCEROL G - 225
1h1w_A_2191h1w   A     SEPPHOSPHOSERINE T - 226
1h1w_A_2191h1w   A     GOLGLYCEROL T - 226
1h1w_A_2191h1w   A     SEPPHOSPHOSERINE A - 227
1h1w_A_2191h1w   A     SEPPHOSPHOSERINE K - 228
1h26_C_1411h26   C     TPOPHOSPHOTHREONINE L - 148
1h26_C_1411h26   C     TPOPHOSPHOTHREONINE A - 149
1h26_C_1411h26   C     TPOPHOSPHOTHREONINE R - 150
1ir3_A_11461ir3   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 1150
1ir3_A_11461ir3   A     MGMAGNESIUM ION D - 1150
1ir3_A_11461ir3   A     MGMAGNESIUM ION F - 1151
1ir3_A_11461ir3   A     MGMAGNESIUM ION G - 1152
1ir3_A_11461ir3   A     PTRO-PHOSPHOTYROSINE M - 1153
1ir3_A_11461ir3   A     PTRO-PHOSPHOTYROSINE R - 1155
1ir3_A_11461ir3   A     PTRO-PHOSPHOTYROSINE D - 1156
1j1b_A_1951j1b   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C - 199
1j1b_A_1951j1b   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 200
1j1b_A_1951j1b   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER F - 201
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE R - 172
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE I - 174
1m2r_A_1701m2r   A     MNY5,8-DI-AMINO-1,4-DIHYDROXY-ANTHRAQUINONE D - 175
1mq4_A_2701mq4   A     ADPADENOSINE-5'-DIPHOSPHATE A - 273
1mq4_A_2701mq4   A     MGMAGNESIUM ION D - 274
1mq4_A_2701mq4   A     ADPADENOSINE-5'-DIPHOSPHATE D - 274
1mq4_A_2701mq4   A     MGMAGNESIUM ION F - 275
1mq4_A_2701mq4   A     MGMAGNESIUM ION G - 276
1mq4_A_2701mq4   A     MGMAGNESIUM ION W - 277
1mq4_A_2701mq4   A     PO4PHOSPHATE ION W - 277
1mq4_A_2701mq4   A     PO4PHOSPHATE ION S - 278
1mq4_A_2701mq4   A     PO4PHOSPHATE ION V - 279
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER M - 155
1o6y_A_1521o6y   A     MGMAGNESIUM ION M - 155
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 156
1o6y_A_1521o6y   A     MGMAGNESIUM ION D - 156
1o6y_A_1521o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 158
1o6y_A_1521o6y   A     MGMAGNESIUM ION G - 158
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 166
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE D - 167
1phk_*_1631phk   *     MNMANGANESE (II) ION D - 167
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE F - 168
1phk_*_1631phk   *     MNMANGANESE (II) ION F - 168
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE G - 169
1phk_*_1631phk   *     MNMANGANESE (II) ION G - 169
1phk_*_1631phk   *     ATPADENOSINE-5'-TRIPHOSPHATE F - 170
1phk_*_1631phk   *     MNMANGANESE (II) ION F - 170
1pkg_A_8061pkg   A     MGMAGNESIUM ION C - 809
1pkg_A_8061pkg   A     ADPADENOSINE-5'-DIPHOSPHATE C - 809
1pkg_A_8061pkg   A     PTRO-PHOSPHOTYROSINE D - 810
1pkg_A_8061pkg   A     MGMAGNESIUM ION D - 810
1pkg_A_8061pkg   A     ADPADENOSINE-5'-DIPHOSPHATE D - 810
1pkg_A_8061pkg   A     ADPADENOSINE-5'-DIPHOSPHATE F - 811
1pkg_A_8061pkg   A     ADPADENOSINE-5'-DIPHOSPHATE G - 812
1pkg_A_8061pkg   A     PTRO-PHOSPHOTYROSINE L - 813
1pme_*_1631pme   *     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 163
1pme_*_1631pme   *     5774-[5-(4-FLUORO-PHENYL)-2-[4-METHANESULFINYL-PHENYL]-3H -IMIDAZOL-4-YL]-PYRIDINE C - 166
1pme_*_1631pme   *     5774-[5-(4-FLUORO-PHENYL)-2-[4-METHANESULFINYL-PHENYL]-3H -IMIDAZOL-4-YL]-PYRIDINE D - 167
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE A - 549
1q8y_A_5431q8y   A     MGMAGNESIUM ION D - 550
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE D - 550
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE L - 551
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE G - 552
1q8y_A_5431q8y   A     ADPADENOSINE-5'-DIPHOSPHATE N - 553
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL I - 380
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL A - 381
1qpc_A_3781qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 382
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL D - 382
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL F - 383
1qpc_A_3781qpc   A     EDO1,2-ETHANEDIOL G - 384
1qpc_A_3781qpc   A     PTRO-PHOSPHOTYROSINE L - 385
1qpc_A_3781qpc   A     PTRO-PHOSPHOTYROSINE R - 387
1qpc_A_3781qpc   A     PTRO-PHOSPHOTYROSINE L - 388
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h1w_A_2191h1w   A BC2SO4 BINDING SITE FOR CHAIN AQ - 220
1h1w_A_2191h1w   A AC1SEP BINDING SITE FOR CHAIN AK - 228
1o6y_A_1521o6y   A MG1MG BINDING SITE FOR CHAIN AD - 156

Clusters included in this Subclass
CLUSTER: AR.5.1