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Information on SUBCLASS 2.9.2
Subclass Accession number: 7223
Subclass: 2.9.2 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 50.0 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: hDRYhh
(φψ)-conformation: bbebaa
Pattern: [NT][IL][V][MV][D][R][Y][AV][FY][S][G][V][A][FY][ST][AG]
Conservation:-0.924-0.750-0.054-0.9241.3380.6422.034-1.4460.468-0.0541.338-0.054-0.0540.468-0.924-1.098
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1nn5_A_921nn5   A92107TLVVDRYAFSGVAFTGEEEEES-HHHHHHHHHxbbbxebaaaaaaaaa
3tmk_A_893tmk   A89104NIVMDRYVYSGVAYSAEEEEES-HHHHHHHHHbbbbbebaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nn5_A_921nn5   A     MGMAGNESIUM ION D - 96
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE D - 96
1nn5_A_921nn5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 96
1nn5_A_921nn5   A     MGMAGNESIUM ION R - 97
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE R - 97
1nn5_A_921nn5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER R - 97
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE Y - 98
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE A - 99
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE S - 101
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE G - 102
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE V - 103
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE F - 105
1nn5_A_921nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE T - 106
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE D - 93
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE R - 94
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE Y - 95
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE V - 96
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE S - 98
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE G - 99
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE V - 100
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE Y - 102
3tmk_A_893tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE S - 103

Clusters included in this Subclass
CLUSTER: EH.1.101