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Information on SUBCLASS 4.2.6
Subclass Accession number: 7338
Subclass: 4.2.6 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 3.9 +/- 5.5
Average RMSD (Å) : 0.800 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpXXhXpX
(φψ)-conformation: bbabpbaa
Pattern: [ETW][AMT][NR][PST]x[LPV][PS][HNR]x[AKS][AEL]x[ADE]xx[ALT][AQT]
Conservation:-0.180-0.0472.4810.487-1.247-0.4471.1521.420-0.7130.353-0.980-1.5130.353-0.580-0.313-0.180-0.047
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c30_A_2951c30   A299315EMNPRVSRSSALASKATEEESS--HHHHHHHHHHbbbabxbaaaaaaaaaa
1dp4_A_1231dp4   A123139TTRTGPSHVKLGDFVTAEEE-S--HHHHHHHHHHxbxabxbaaaaaaaaaa
1gup_A_1661gup   A170186WANSFLPNEAEREDRLQEEESS--HHHHHHHHHHbxbabbxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c30_A_2951c30   A     ADPADENOSINE-5'-DIPHOSPHATE I - 298
1c30_A_2951c30   A     MNMANGANESE (II) ION E - 299
1c30_A_2951c30   A     ADPADENOSINE-5'-DIPHOSPHATE E - 299
1c30_A_2951c30   A     PIHYDROGENPHOSPHATE ION E - 299
1c30_A_2951c30   A     MNMANGANESE (II) ION M - 300
1c30_A_2951c30   A     MNMANGANESE (II) ION N - 301
1c30_A_2951c30   A     ADPADENOSINE-5'-DIPHOSPHATE N - 301
1c30_A_2951c30   A     PIHYDROGENPHOSPHATE ION N - 301
1c30_A_2951c30   A     MNMANGANESE (II) ION R - 303
1c30_A_2951c30   A     ADPADENOSINE-5'-DIPHOSPHATE R - 303
1c30_A_2951c30   A     PIHYDROGENPHOSPHATE ION R - 303
1c30_A_2951c30   A     PIHYDROGENPHOSPHATE ION S - 305
1c30_A_2951c30   A     MNMANGANESE (II) ION R - 306
1c30_A_2951c30   A     ADPADENOSINE-5'-DIPHOSPHATE R - 306
1c30_A_2951c30   A     PIHYDROGENPHOSPHATE ION R - 306
1c30_A_2951c30   A     PIHYDROGENPHOSPHATE ION S - 307
1gup_A_1661gup   A     GDUGALACTOSE-URIDINE-5'-DIPHOSPHATE G - 166
1gup_A_1661gup   A     GDUGALACTOSE-URIDINE-5'-DIPHOSPHATE G - 167
1gup_A_1661gup   A     GDUGALACTOSE-URIDINE-5'-DIPHOSPHATE Q - 168
1gup_A_1661gup   A     GDUGALACTOSE-URIDINE-5'-DIPHOSPHATE W - 170
1gup_A_1661gup   A     FEFE (III) ION E - 182

Clusters included in this Subclass
CLUSTER: EH.5.156