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Information on SUBCLASS 6.10.1
Subclass Accession number: 774
Subclass: 6.10.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 13.8 +/- 15.8
Average RMSD (Å) : 0.850 +/- 0.233

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hppppcXXhX
(φψ)-conformation: bbapllppbb
Pattern: xx[cimtv][cdnstv][dekn][ehknrt][dr][DGN]xx[GIV]xxx
Conservation:-0.770-0.7690.212-0.3810.386-0.1160.2062.924-0.880-0.8590.938-0.115-0.099-0.677
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d0n_A_6411d0n   A643656FACSNKIGRFVIEEEEEE-TTT--EEEEbbbbaplUbxbbbx
1g8p_A_1721g8p   A172185ENVVERDGLSIRHPEEEE--TT--EEEEbbbbablvbbxbbx
1h09_A_2901h09   A292305YYMTNERGNMVSNEEEEE-GGG--EEEEbbbbaplvxxbbxb
1je0_A_341je0   A3750KLTNENRGFLVYTGEEEE-GGG--EEEEbxabapUvxxbbbb
1k7j_A_1831k7j   A183196TVIDLTDDTPVVVREEEE-GGG--EEEExbbxaxllbpbxab
1o0w_A_1861o0w   A190203VRTEKNDGDRIFVVEEEE--TTS-EEEEabbbaxvgxxbxbb
1odk_A_351odk   A3851RRYNDHRGLWGYTGEEEE-GGG--EEEEbxabapUvxpbbbb
1vhw_A_351vhw   A3851VQVCDVRNMFGYTGEEEE-GGG--EEEEbxabNxlvxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k7j_A_1831k7j   A     MSESELENOMETHIONINE L - 187
1k7j_A_1831k7j   A     MSESELENOMETHIONINE R - 196
1vhw_A_351vhw   A     ADNADENOSINE R - 44

Clusters included in this Subclass
CLUSTER: HA.5.111
CLUSTER: HA.7.16